| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1063 |
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| Symbol | |
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| ID | 4463078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1147963 |
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| End bp | 1149192 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639700081 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_843487 |
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| Protein GI | 116754369 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0896944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATATTA GAAACAAGAA CATCCTCATA ACGGGAGTAA GCGGTTTTGT TGGCTCGCGG
ATGGCCAGGC GGCTTGTTGA TGCGGGTGCA TCTGTTTACG GGCTCGTGCG GCGCAGGTCT
GATGGCAGGA TGCCAGTCAA CCTGGAGCGA CTTGGGATCA AAAAAGATGT CCGGCTTATA
GAGGGCGATC TTGAGAATAT CTCCAGCATA GGAAACGCGA TAACAGCAAG CGATCCGGAT
ATAATATTCC ATCTGGCTGC ACAATCCTTT GTGCCAAGGT CATTTGTTGA TCCTAACGAG
ACTATGCTCT GTAACTGCTG GGGGACCTCG AACCTTCTGG AGGCAGTTCG GCTTAAAGAT
GTCGATGCCA CCGTGGTCTT CGCGGGAAGC AGTGAGGAGT ATGGGCTAGT CATATCCTCT
GAGGAGCAGT ACAAAAGAGC GCTTGAAAAG TACGGAGCAG TGTTCCCTGA GCCTGAGCGC
ATACCCGAGC TTCCGATATC TGAGACAAAC CCTCTGAGAC CCATGTCTCC ATATGCGGTG
AGCAAGGTCT ACGGCGACTA CCTGATGAGG AATTACTGGC ATTCCTATGG AATACCGACT
GTGGTCTCCA GGGCGTTCAA CCACGAGGGA GCAGGCAGAG GGATAATGTT TGTGACATCA
GTCATAACCA GCCAGGTTAT GAAGCTCAAG CTCGGCGAAA TAGATGGTAT TACCATAGGA
AATGTGAACG CCTTTCGCGA CTGGAGCCAT GTGGACGATA TCATAGATGG TTATATTTTG
CTGGCAGTGA AGGCCAAACG TGGCGATGTT TACAACCAGG GGTCAATGCG GACCAACTCT
GTGCTGAGCT ATATTCTCAT GAGCCTTGAG GAGGCAGGCT ATCCTGTAAG CAGGATCGAG
ACCTTCCACG GCGAGAAGAT TGTGGACGAT CCCACAGAGC CTGACAGCTC ACCGATATTC
GGCCTGAACT TCGACAAAAC AACGGTGGAT GGCATGATGC TTCGCGGGGA GCTAGAATTT
GTGCAAGAGG ATGGAGGGAT TATAGCACAC TCCGGAGAGA GACGTATAAG GATAGTATTC
GAGAGGGAGC GGTTCAGGCC TGCCGAGGTA CCTATTCTGC TATCAGATAC CAGAAAGATA
GAGTCGATCG GATTCATGGT GAGGCATACC GTAAGAGATA TCATAAGAGA TCAGCTGGAT
CAATTCCTAT CTGACAAGGA AAGAAAGTGA
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| Protein sequence | MDIRNKNILI TGVSGFVGSR MARRLVDAGA SVYGLVRRRS DGRMPVNLER LGIKKDVRLI
EGDLENISSI GNAITASDPD IIFHLAAQSF VPRSFVDPNE TMLCNCWGTS NLLEAVRLKD
VDATVVFAGS SEEYGLVISS EEQYKRALEK YGAVFPEPER IPELPISETN PLRPMSPYAV
SKVYGDYLMR NYWHSYGIPT VVSRAFNHEG AGRGIMFVTS VITSQVMKLK LGEIDGITIG
NVNAFRDWSH VDDIIDGYIL LAVKAKRGDV YNQGSMRTNS VLSYILMSLE EAGYPVSRIE
TFHGEKIVDD PTEPDSSPIF GLNFDKTTVD GMMLRGELEF VQEDGGIIAH SGERRIRIVF
ERERFRPAEV PILLSDTRKI ESIGFMVRHT VRDIIRDQLD QFLSDKERK
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