Gene Mthe_1054 details

Gene Information

• Locus tag: Mthe_1054
• ID: 4463122
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1139499
• End bp: 1140041
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639700072
• Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
• Protein accession: YP_843478
• Protein GI: 116754360
• COG category: [C] Energy production and conversion
• COG ID: [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
• TIGRFAM ID: [TIGR01971] NADH-quinone oxidoreductase, chain I

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCTCA AGTCGTTGAA GTACACTCTG AAGACAGCGC TCACCACAAC AGAGGTCACC 
AGGCTGTATC CAGAGGTCAT GATGGAGCTG CCCGCAAACG AAAGGGGCAT ACACGAGCTC 
GACGCCACGA CGTGCATAGG CTGCGGCTCA TGCGCTAGGG TCTGCCCGAA CAGCTGCATC 
GAGATGGTTC CGTATAAGTA TGGCAACCCG CTGAAGAACA GGAAGATGCA GTTCCCGCAG 
ATCGATTATG GAAGGTGCAC ATTCTGTGGC CTTTGTGTCG ATGAGTGCCC AGTCTCCTGC 
CTGAAGATGG GAAAGAGGAC AGAGATCGCC GGCTGGGATA GAAAGGACAT AGTATACGGG 
CCTGACAGGA TCGCGGTGAA GAAGTTCTCC GACAAGGAGG TCGCTGAGCT AGAGGCTGAG 
GCAAAGCGGC AGGCTGAGGA GAAGAAGAAG GCTGCTGCGG CAGCAGCAAA GGAGAAGGCC 
GCAAAGGCGA AGGGGAAGGA GAACAAGGCA AAGACGAAGC CGAGCGAGGG TGGTGAGGCC 
TGA 

 

Protein sequence

MVLKSLKYTL KTALTTTEVT RLYPEVMMEL PANERGIHEL DATTCIGCGS CARVCPNSCI 
EMVPYKYGNP LKNRKMQFPQ IDYGRCTFCG LCVDECPVSC LKMGKRTEIA GWDRKDIVYG 
PDRIAVKKFS DKEVAELEAE AKRQAEEKKK AAAAAAKEKA AKAKGKENKA KTKPSEGGEA