| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1036 |
|---|
| Symbol | |
|---|
| ID | 4462784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 1119158 |
|---|
| End bp | 1120084 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639700054 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_843460 |
|---|
| Protein GI | 116754342 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG CCCGGTACGT GATCTCGCTT TTTGTCATAC TCTCGCTGAA CTTCGCCATA
CCGAGGGCGA TGCCCGGCGA TACCATGACG AACCTCCTCG GAGAGGATGT GATTCTGAGC
GATGATCTTG TGCAGGAGAT CAGGAGGGAG ATGGGGCTGG ATCTACCCCT GAAAGAGCAG
TACATCATGT ACTGGAAAAA CATCCTCAAC CTTGATCTTG GCTACTCGTA CCACTTCCAC
TCTCCTGTTC TGCCACTCGT TCTTGAGAGA ATGAAATGGA CCCTTCTTCT CGCAGCCCCT
CCTGTGATCA TAGGAGCTCT TCTCGGAACG CTGCTCGGGG CGCTCGCTGG CTGGAGGGAG
TCCCCCAGCT CCCGCCTCCA GACTTTCATC TTTCTCACCA TCTACTCCAC GCCGCCGTAC
TTTCTGGCGC TCCTGTCTCT CTACATATTT GGTTTCCATC TCAGCTGGGT TCCGATGAAG
GGGTTCTACA GCACAGGTTC TCCGGAAAAT ATAATTCATC ATATCATACT CCCTGTGATC
CTCATGAGCC TCTTCTCAGC CTCCCGGAAT TACATGATCA TGAGGGGCAG CGTGATCCAG
GAGAGGCGGA CTCTGTATGC ACTGTATGCG AGGGCGAAGG GTCTCTACGA CAGCCAGATC
CTCTTCAGGC ATCTATTCAG AAACGCAATC CTCCCGATAA TAACGCTGAT CGCCCTCGAC
TTCGGATTCA TATTCAGCGG GGCGCTGTTC ATAGAGATGG TCTTTTCGAT GCGCGGTATG
GGAAATCTCA TCTACAGTGC GCTCATGTAC AGGGATTATC CCGTCCTGCA GGGCTCATTT
CTCGTAATAA CCATGATGGT GGTAACGGCG AACATGATCG CGGATGTGCT CTACGGCATT
CTTGATCCAA GGGTGAGGGG CAGATGA
|
|---|
| Protein sequence | MNLARYVISL FVILSLNFAI PRAMPGDTMT NLLGEDVILS DDLVQEIRRE MGLDLPLKEQ
YIMYWKNILN LDLGYSYHFH SPVLPLVLER MKWTLLLAAP PVIIGALLGT LLGALAGWRE
SPSSRLQTFI FLTIYSTPPY FLALLSLYIF GFHLSWVPMK GFYSTGSPEN IIHHIILPVI
LMSLFSASRN YMIMRGSVIQ ERRTLYALYA RAKGLYDSQI LFRHLFRNAI LPIITLIALD
FGFIFSGALF IEMVFSMRGM GNLIYSALMY RDYPVLQGSF LVITMMVVTA NMIADVLYGI
LDPRVRGR
|
|---|
| |