| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1028 |
|---|
| Symbol | |
|---|
| ID | 4462777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1111268 |
|---|
| End bp | 1112260 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639700047 |
|---|
| Product | DNA primase large subunit |
|---|
| Protein accession | YP_843453 |
|---|
| Protein GI | 116754335 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2219] Eukaryotic-type DNA primase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.163924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCAT TCTGGTATCC GTTCACACAC GCAGCAGCAA AGGAGATCCG GCTTATCGAT
GCTCCGCTGG AGGACGTGCT CAGCAGCAGG GCGTTTCAGC CTGTCAGGCG CAGGGCAGTT
GAGCGCGTCC GCGGAGCGCT GCATGGAGAG ATACCTGATG CGGATGCATC AGACGGCGTG
AAGCAGAACG TAGAGCTTTT ATCGTATCCT CTCGCCAGGC TGATCGTCTC GTGCATTGAT
GATGACTACC TTCTGAGGCG CTATGTCCTG GCGGAGGCGA AGCTCGCCCA CAGGAGGTTG
AGAAGCTCAG ACACAGAAGA GGTGCTTGAG ATAGCCAGGG ATCTGGGGAT GAGTCCGATT
TATGAGGGGG ATAACTTCAG AATACATTTT ACGGATTTTG TGATCTCCGC GGCGAGGTTC
AGGAGCCAGA AGTGGAAGCT CATCAACAGA ACCATCGACC ACGGCTATCT CAAAGTTACC
CGGGAAGAGC TGCTCCGCCT GATGCAGGAG AGAATCAGGG ACAGGATACA GGAGGGGCTC
CCGCTCGATG CTGGAAGCAT ATGTGAGGGG CTGTCGGATC ACCTGAGATC CATAAGAGAC
GAGCTCGCAT CATCGAAGCG GAGCTCGATG GTGGATCTCG GTGAGTTCAG CCGGGACGCT
CTGCCGCCAT GCATGAGATC GCTGCTGGAG CAGCTCGCTG CCGGCAGAAA CCTTGCTCAC
ACAGCGAGGT TTGCGCTCAC AAGCTTTCTG CTCAACATAA ATCTGGGTGT CGAGGATATA
ATCGGCATCT TCAACAACAC CCCCGATTTC GATGAGGAGA TGACAAGATA TCAGATAGAG
CACATCGCCG GCTCTACAGG AACGAGATAC ACCCCACCTT CATGCTCCAC GATGCTCACA
TACGGTAACT GTCCTGGAGG CGATGAGCTC TGCAGGCGCA TAAAGCACCC AATAAGCTAC
TACAGGCGTC GCCTGCGTGA ATCGCGATCC TGA
|
|---|
| Protein sequence | MRAFWYPFTH AAAKEIRLID APLEDVLSSR AFQPVRRRAV ERVRGALHGE IPDADASDGV
KQNVELLSYP LARLIVSCID DDYLLRRYVL AEAKLAHRRL RSSDTEEVLE IARDLGMSPI
YEGDNFRIHF TDFVISAARF RSQKWKLINR TIDHGYLKVT REELLRLMQE RIRDRIQEGL
PLDAGSICEG LSDHLRSIRD ELASSKRSSM VDLGEFSRDA LPPCMRSLLE QLAAGRNLAH
TARFALTSFL LNINLGVEDI IGIFNNTPDF DEEMTRYQIE HIAGSTGTRY TPPSCSTMLT
YGNCPGGDEL CRRIKHPISY YRRRLRESRS
|
|---|
| |