| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1000 |
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| Symbol | |
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| ID | 4462876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1083515 |
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| End bp | 1084273 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639700019 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_843425 |
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| Protein GI | 116754307 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTCG TATACAGCAG GGGCTTTGAG AAGCGGTATC CCACAAATCC TGTTGAGAAT
CCTGACAGAG TCAGGCTTAC AGCCCAGGAG CTCTCTGGCT ACGAGTTTTT CGAGCCAGCT
CCAGCGAGCC AGGAGGAGAT CGCATCGGTC CATACCTCAG GGCATATTGA GCGCGTCAGA
ATGCGAGGGC TCTACGGGGC TGCAGCCCTT GCAGCTGGTG GCGCTGTTGC AGCCGCGAGG
ATCGCACTGA GAGAGCCGGC CTTCGGGCTG ATCCGCCCGC CAGGACATCA TGCATCCTCT
GATCACTCAT GGGGCATGTG CTTCTTCAAC AACATCGCTG TGGCTGTGAA GGCCATCAGG
CCTCATGTCC GAAGGGTCCT TATCCTGGAC ATCGACCTGC ATTTCGGAGA CGGCACTGTG
AGCATATTTC GATGGGATCC GGATGTGAGC GTTGTCAACA TCGGCGCCAT CGACATTAAC
TTCGATTACA TAAATCTCGA TAGCATCGGA TATATCGAGC AGGTGAAAAA CGCGCTCGAA
TTCCACGAGT ACGATATCAT AGGCGTGTCA GCGGGCTTTG ACACATATCG TCTGGACTGG
GGCGGTATGC TCGATATAGA CGACTACAGG AAGATCGGTT CCCTGATAAG AGATGCATCT
GAGGAGAGAT GCGGCGGGCG CAGGTTCGCT GTTCTCGAAG GCGGGTATCA TCAGGATCTG
AGATACTGCA TCAGGAGTTT CGTTTCCGGA TTCGAATGA
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| Protein sequence | MIVVYSRGFE KRYPTNPVEN PDRVRLTAQE LSGYEFFEPA PASQEEIASV HTSGHIERVR
MRGLYGAAAL AAGGAVAAAR IALREPAFGL IRPPGHHASS DHSWGMCFFN NIAVAVKAIR
PHVRRVLILD IDLHFGDGTV SIFRWDPDVS VVNIGAIDIN FDYINLDSIG YIEQVKNALE
FHEYDIIGVS AGFDTYRLDW GGMLDIDDYR KIGSLIRDAS EERCGGRRFA VLEGGYHQDL
RYCIRSFVSG FE
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