Gene Mthe_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0960 
Symbol 
ID4461794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp1045289 
End bp1046545 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content48% 
IMG OID639699980 
Productpolysaccharide pyruvyl transferase 
Protein accessionYP_843388 
Protein GI116754270 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.63346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGGTA ATAGATTACG ATTTATTCTG GCCGGGAATG GCCCCTACGA GAACCGCGGG 
TGCGAGGCGA TTGTGCGAGG GACTGTGAAG ATCCTGCGTG AGCACTTTAA AGACCCACAA
TTCATCTGTC TTAGCCATTT TCAGAACGAT GAGCAGTTTA GAAAGCAATG CTTGGAAGAG
AGCGATCCTT CTATTACCCA CTTACGTTCA TACATATTGA GTAAGAAAAA AGCCATCAAG
AATTTTTGGA AACCAGGAAC TTGGTCATAC GTCTACCGGC ACTTTTTCAA TCGGCCGGCA
CTCAAATACC ATATCTACCG TGATATGCTC TCACATCTTG ATGATGCTGC TGCAGTTCTC
TCTGTCGGCG GGGATAACTA CTCTCTCGAC TACGGTGTTC CTCAGTTCTT CACAGACCTT
GATGACATCG TCCTTGAAAA GAAAAAACCT CTATTTCTCT GGGGTGCCTC GGTTGGACCT
TTCAGTGCAA TACCTGAGTA CGAGCGATAT ATGAGACACC ATCTAAAGGA GGTTACTGGA
ATCTTTGCCA GGGAGTCGCT CACGATTAAT TACCTCAAAA GTATTGGCGT AACCGAGAAT
GTCTACTCCG TCGCGGACCC AGCGTTCCTA ATGGAGCCAG TTAAACCACA GGGAATCGAT
GCCAAGCTTC CTATTAACGG AGAGGCAATC GGCATAAACC TCAGTCCGTT GATGGCGAAG
TATGTGACCA ACGGCGATCT TGAAGTGTGG AGCAGTATGG CAGCATCGAT CATTGAGAGC
GTAGCGCAAA AGACGGGGCT ATTAATATAC TTGATCCCAC ATGTGACCCA GCCCAACCAA
TTTTCGAACG ACTACGCATT TATGCAGCGT GTTCTCTCTC AGATCAAAGA CAAATACAAC
ATAATCATAG TCCCCCCAGT ATATAATGCC GCAGAAACAA AATGGATTAT TAGCCGGATG
ACTCTTTTCG CGGGGGCACG GATGCACTCA ACGATTGCTG CAATATCATC AGGGGTACCA
ACCCTAAGCT TCGCCTACAG CATCAAGGCC CGAGGAATCA ACAGAGACAT CTTTGGCCAC
ACCAACTACT GCATGGACCC TGAATATCTA GATTCGAAGG CAGTTGCCGG CCGAGTGACA
TCCATGCTGG ACGAGGTCGC TACGATTAGG AAAGAATTGG CGTGGAGGAT TCCGGAGGTT
CAGAGGGCAG CGCAGAATGC TGGTATGTTA CTGAGACATC TCATTGGAGA TAACTGA
 
Protein sequence
MGGNRLRFIL AGNGPYENRG CEAIVRGTVK ILREHFKDPQ FICLSHFQND EQFRKQCLEE 
SDPSITHLRS YILSKKKAIK NFWKPGTWSY VYRHFFNRPA LKYHIYRDML SHLDDAAAVL
SVGGDNYSLD YGVPQFFTDL DDIVLEKKKP LFLWGASVGP FSAIPEYERY MRHHLKEVTG
IFARESLTIN YLKSIGVTEN VYSVADPAFL MEPVKPQGID AKLPINGEAI GINLSPLMAK
YVTNGDLEVW SSMAASIIES VAQKTGLLIY LIPHVTQPNQ FSNDYAFMQR VLSQIKDKYN
IIIVPPVYNA AETKWIISRM TLFAGARMHS TIAAISSGVP TLSFAYSIKA RGINRDIFGH
TNYCMDPEYL DSKAVAGRVT SMLDEVATIR KELAWRIPEV QRAAQNAGML LRHLIGDN