Gene Mthe_0955 details

Gene Information

• Locus tag: Mthe_0955
• ID: 4461789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 1040250
• End bp: 1040813
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639699975
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_843383
• Protein GI: 116754265
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.263275
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTTCA GCTTCAAGAG ACTTGATATT TATGATGTGA TCCTGATCGA GCCCAGGGTA 
TTCAGGGACG AGCGCGGGTT CTTCATGGAG AGCTACAAGC ACTCGGAGTT CGCTGCGTTC 
GGAATAAAAG AGAGGTTCGT CCAGGACAAC CACTCTCGCT CGAGAAGGGG TGTTCTGAGG 
GGGCTTCACT ACCAGAACCC GCCGAGGGCT CAGGGTAAGC TCGTTCGCGC TGTGAGTGGC 
GAGATATTCG ATGTCGCTGT GGATATCAGG AGGGGCTCGC CGACGTACGG GAGATGGGTT 
GGCGTTAATC TCTCCGAGGA GAACATGAGG ATGCTCTACA TACCCCCTGG ATTCGCCCAT 
GGTTTCATGA CGCTCAGCGA TGTGGCCGAT GTCATGTACA AGACCACGGA CGAGTACTCG 
CCGGAGCATG AGGCCGGGAT CATATGGAAC GATCCCGGGA TCGGGATTGA GTGGCCGGCG 
TCCAGACCGG TGCTCTCGCC CAGAGATGCG AAATGGCCTG GCCTGCGGGA CGCTGTGAAC 
GGTTTTGTTT ATGAGGGGAG ATGA 

 

Protein sequence

MPFSFKRLDI YDVILIEPRV FRDERGFFME SYKHSEFAAF GIKERFVQDN HSRSRRGVLR 
GLHYQNPPRA QGKLVRAVSG EIFDVAVDIR RGSPTYGRWV GVNLSEENMR MLYIPPGFAH 
GFMTLSDVAD VMYKTTDEYS PEHEAGIIWN DPGIGIEWPA SRPVLSPRDA KWPGLRDAVN 
GFVYEGR