| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0937 |
|---|
| Symbol | |
|---|
| ID | 4463330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 1022194 |
|---|
| End bp | 1023012 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639699956 |
|---|
| Product | prephenate dehydratase |
|---|
| Protein accession | YP_843365 |
|---|
| Protein GI | 116754247 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGATAG GCGTTCTGGG GCCGAGGGGC TCCTACTCGG AGATGGCTGC ATCGAGGCGC
TTTCCGGATG CAGAGCTTGT ATACTTCGAT GATATAGAGG ATGTCTTCGA TGCCGTGGAA
AGCCATAAAG CGGATGCAGG AGTTGTACCG CTGGAGAACA GCCTGGAGGG ATCTGTGGCT
CTGACCCTGG ATCTTCTTCT CAGTAGATCC CTCTTCATAT GCGGGGAGGT CGTGATCCCG
ATAAGACACT GTCTTCTGGG TAGAGGAGAT CCAGATAGCG TCAGAATCAT ACTCTCACAC
CCCCAGGCGC TCGCCCAGTG CAGGCAGTAC ATCCGGCGCA GGTATCCTGG TGTTGAGATG
AGGACCACAG GGTCCACGAG CCATGCGGCC AGGCTGGCTC AGGAGTTCCC GGAGATGGCT
GCGATAGCGA ACCTGGAGGC TGCGAAGACA TACGGTCTCA GGGTGCTGGA CAGGGATATA
CAGGACTCGA AGAACAACAT GACGAGATTT GTTGTTCTCT CCAGAGAGAT GTCGAAGAGA
ACAGGCAATG ACAAGACATC GATAGTTGTT TATCTGGAGA AGGACAGGCC CGGAGCACTT
TTCGCCATCC TCAGAGAATT CGCTGTCAGG AACATCAACC TCACACGGAT AGAGTCCAGA
CCCAGCAGGA AGGAGCTGGG GGATTACTAC TTTTTCATAG ACCTGGAGGG GCATGTAGAA
GATGATGCTG TGCGAGAGGC GCTGGATGGC ATCGAAAAGG CCGCGAACAT GGTCAGGGTT
CTGGGATCGT ATCCGAAAGA CAATACACCT TCAGAATAA
|
|---|
| Protein sequence | MRIGVLGPRG SYSEMAASRR FPDAELVYFD DIEDVFDAVE SHKADAGVVP LENSLEGSVA
LTLDLLLSRS LFICGEVVIP IRHCLLGRGD PDSVRIILSH PQALAQCRQY IRRRYPGVEM
RTTGSTSHAA RLAQEFPEMA AIANLEAAKT YGLRVLDRDI QDSKNNMTRF VVLSREMSKR
TGNDKTSIVV YLEKDRPGAL FAILREFAVR NINLTRIESR PSRKELGDYY FFIDLEGHVE
DDAVREALDG IEKAANMVRV LGSYPKDNTP SE
|
|---|
| |