| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0892 |
|---|
| Symbol | |
|---|
| ID | 4461849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 968073 |
|---|
| End bp | 969080 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639699911 |
|---|
| Product | thiamine biosynthesis protein |
|---|
| Protein accession | YP_843320 |
|---|
| Protein GI | 116754202 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.122669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATGTG AGGGCGGGAG GATATACGTC CACACCTCGG ATGAAAGAGC GCCCTCCACG
ATCTCCAAAG TTTTTGGCGT GGTTTCGGTC AGCCCCGCCT ACAGCGTGAG TCCCAGGATG
GCTGATATCT CCAAGCTCGC TGTGGATATC GCAATGATGC GCTCGCCGGG GAGCTTTGCC
ATAAGGGCGA GGCGGGCTGG AGGTGAGATG CCCAGCGGGA GGATAGCCGT GGAGGTCGGA
GCTGCGGTCC AGCGTGCCAC CGGTGCCGAT GTCGATCTTG ATAATCCGGA TCTTGAGATA
TTCATCGAGG CCCGCCCGGA CAGGGCGCTG GTCTTCACAG AGATCGTGAG GGGCGTTGGA
GGCCTCCCCC TGGGATCGCA GTCCAGGATG CTCGCGCTGA TCTCCGGCGG CATAGACTCT
CCAGTGGCGG CATGGCTTAT CATGCGTCGC GGATGCCCTG TAGCGCTGCT CCACCTCGAT
GTCTCGCCAT ATGCTGACTC CATAGAGCAG GTGGTCAGAC AGGCAGAGGT GCTTCAGAGC
TGGATGTCTG GAAGGCGGCT CGATCTGGCG ATCGTGCGCA ATGCACGCGC GATCGAGATG
ATCTCATCAA GATACCCGAG GGAGACCTGC GTTCTGTGCA GGCGTCTGAT GTACCACATC
TCCACTCTCG TGATGAAGCG GCTGAGAGCA AAGGGCATCG TGACAGGATA CTCCCTCGGG
CAGGTGGCGT CCCAGACCCC TGAGAACATA ATGGCAGAGC AGGTTGGGAT CGAGGCGCCA
GTGTACCATC CACTGATCGC GATGGACAAG ACCGAGATCA TCGAGCTGGC GCGCAGGATA
GGCACATACG ACATATCAAT CGGATCACAG CAATGCCGGG CAGCGCCGAA GAAGCCTGTG
ACGAGGGCAA GGTTAGAGGA GATACTGAGA ATCGAGGGGG AGCTTGGTCT GAGAGATCTC
GCAATGGAGC TCGCTGACGG CGTGGAGATT GTAAGAATAA GGAGATAA
|
|---|
| Protein sequence | MTCEGGRIYV HTSDERAPST ISKVFGVVSV SPAYSVSPRM ADISKLAVDI AMMRSPGSFA
IRARRAGGEM PSGRIAVEVG AAVQRATGAD VDLDNPDLEI FIEARPDRAL VFTEIVRGVG
GLPLGSQSRM LALISGGIDS PVAAWLIMRR GCPVALLHLD VSPYADSIEQ VVRQAEVLQS
WMSGRRLDLA IVRNARAIEM ISSRYPRETC VLCRRLMYHI STLVMKRLRA KGIVTGYSLG
QVASQTPENI MAEQVGIEAP VYHPLIAMDK TEIIELARRI GTYDISIGSQ QCRAAPKKPV
TRARLEEILR IEGELGLRDL AMELADGVEI VRIRR
|
|---|
| |