Gene Mthe_0853 details

Gene Information

• Locus tag: Mthe_0853
• ID: 4463066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanosaeta thermophila PT
• Kingdom: Archaea
• Replicon accession: NC_008553
• Strand: +
• Start bp: 919888
• End bp: 920373
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639699873
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_843282
• Protein GI: 116754164
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGGG GCAGGGCATG GGTCTTTGGG GATGATGTTG ATACAGATGT AATAATTCCA 
GGGAAATACC TCAGGACAAA GGATCTGCGC GAGCTGGCGG AGCACGTCAT GGAGGGTCTG 
GATCCGTCGT TCTCATCAAA GGTCCAGCCA GGGGATGTTA TAGTAGCAGG CAAGAACTTC 
GGGTGCGGCT CTTCCAGGGA GCAGGCCCCG CTTGCCCTGA AGCTCGCAGG AATATCATGC 
ATCGTCGCCC GATCCTTCGC CAGGATATTT TACAGGAACG CCATAAACAT CGGTCTCCCT 
CTCATTGAGG CAGATGTCAT GTGCGAGCCG GGGGAGGTCG TGGAGGTAGA TCTCTCCCGG 
GGGAGGGTCA TCGCAGGCGG AAGGGAATAT ACCGGCAGAA AACTTCCGGA CTTCCTGATG 
GAGATCCTGA ACGATGGAGG GCTCGTGGCC CACAGAAGAA AGCAAAGGGA GCGCGGTCTG 
ATTTGA 

 

Protein sequence

MIRGRAWVFG DDVDTDVIIP GKYLRTKDLR ELAEHVMEGL DPSFSSKVQP GDVIVAGKNF 
GCGSSREQAP LALKLAGISC IVARSFARIF YRNAINIGLP LIEADVMCEP GEVVEVDLSR 
GRVIAGGREY TGRKLPDFLM EILNDGGLVA HRRKQRERGL I