Gene Mthe_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0826 
Symbol 
ID4462969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp890397 
End bp891284 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content55% 
IMG OID639699844 
Productdihydrodipicolinate synthase 
Protein accessionYP_843255 
Protein GI116754137 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.545696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGAG GGGTATTTCC CGCTATTATA ACCCCCTTTA AGGACGATGG ATCTCTGGAC 
GAGGACGGAC TGCGAAGAAA CGTAGAGGTT CTCTCAAAGA CCGGCATCTC AGGCGTGGTA
CCCTGCGGCA CCACCGGCGA GTCCGCGACG CTGAGCCACG AGGAGCACAA GAAGGTCGTC
GAGATAGTGG TCGACTGCTC AGATGTGCCG GTTGTGGCAG GGACAGGCTC CAACAACACA
TCAGAGGCGA TAGAGCTGAC AAGGCATGCC GCCGATGCCG GGGCAGATGC AGCTCTTCTT
ATAACACCAT ATTACAACCG TCCGAATGAG AGGGGTCTGT TTGAGCATTT CAGGAAGGTT
GCAGAATCCT CTGATATCCC CATAGTTCTT TACAACGTTC CGAAGAGGAC CGGCGTTGAG
CTCCGTCCCG ATGTGGTGGC CAGGCTATCC GAGATAAGCA ATATCGTTGC AATAAAGGAG
GCCAGCGGAA GCCTGACACA GGTTTCAAGG ATAATAGAGC TCACAGCAGA TAAGAACTTC
GCAGTGCTCT CCGGAGACGA TGACCTCACG CTGCCAATGC TGGCCCTTGG CGCAACCGGT
GTCGTCTCTG TTGTTGCCAA TGTAGCCCCG CGTGCTACGG TGGAGATGGT CAACGCGTTT
CTGGATGGGA ACATCACAAG GGCGCAGGAA CTTCACTACA GGCTTGCTCC ACTCGTACGC
GCGATGTTCC TTGAGACGAA CCCGATACCT GTAAAGACCG CATACCGCAT GCTTGGGATG
GCAGCCGGTC CGCTCAGACT CCCGCTGGCT CCGATGTCTG ATGAGAACGA GGCGAAGCTC
AGGGATGTGC TTACAAAGAT GTCAGATCTG ACGGGCGATA TGAGATGA
 
Protein sequence
MFRGVFPAII TPFKDDGSLD EDGLRRNVEV LSKTGISGVV PCGTTGESAT LSHEEHKKVV 
EIVVDCSDVP VVAGTGSNNT SEAIELTRHA ADAGADAALL ITPYYNRPNE RGLFEHFRKV
AESSDIPIVL YNVPKRTGVE LRPDVVARLS EISNIVAIKE ASGSLTQVSR IIELTADKNF
AVLSGDDDLT LPMLALGATG VVSVVANVAP RATVEMVNAF LDGNITRAQE LHYRLAPLVR
AMFLETNPIP VKTAYRMLGM AAGPLRLPLA PMSDENEAKL RDVLTKMSDL TGDMR