| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0785 |
|---|
| Symbol | |
|---|
| ID | 4462424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 834346 |
|---|
| End bp | 835884 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639699796 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_843214 |
|---|
| Protein GI | 116754096 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0600833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAT TGAAAGACGT TTTGTGCACT GCAATACTGA TATCGCTTCT TCTGCCGGCA
GTTGCAGAGG AGATACCGGT ATACACGATA GCGGACACGA CCGGGGACTG GGGGTACCCA
TCGCCGTACC TCCACTACTC CAGGGGTCCG GGTTACGTGC GGATGAGTTT CATCTTCGAT
ACACTGGTCT GGAAGGACCA GAACGGCTTC GTGCCTGCGC TCGCGGAGAG CTGGGAGTAT
CTGGAGGGCG AGAACGCGTA TCTCTTCAAT CTGAATCCGA ACGTGAAATG GCATGACGGT
GAGCCATTCA CCGCAAACGA CGTTGTATTC ACGATCAACT ACATAAAAGA TCATCCGTAC
CAGTGGGTCG ACAGCAGCAT TGTGGATAGG GCTGAGAAGA TCGATGATCA CACGGTGAAG
ATCTACCTGG CGAAGCCCTA CGCGCCGTTT TTGGACCAGG TGGCTGGCAC TCTGCCGATT
CTCCCAGAGC ACATCTACAG CGATGTGACA AACCCGGAGG ATTTCCAGGA TCCAAAGGCG
CTTACAGGCA CAGGACCGTT CAAGCTTGTC GATTACGACA AGGCCCAGGG GACATATCTG
TATGAGGCGA ACGAGGATTA CTACCAGGGC GCTCCGAAGG TTAAGCAGCT GAAGTTTGTA
AAGCTGAGCT CAGAGATGTC CGGGCCGGCG CTGAAGCGAG GCGAGGTCGA TGCCACGGCA
GTTCCACCAG AGGTCGCTGA CGAGCTCAGG GGCAGCTTCG TCGTTCTCGA AGGCGCTCAT
GACTGGCTCG CGAAGCTGAT GATAAACCAC AAGAAGGAGC CGTTCTCCGA TGTGAGGTTC
AGGCAGGCTC TCGCATACGC CATAGATAGA GAGAAGCTCG TCGAGATAGC CCAGCGCGGA
TATGGCGTTC CTGCGAGCCC CGGACTATTC GCGCCTGACA GCGAATGGTG CAACCCGGAT
GTGGAGCAGT ACGAGCATGA TCCTGAGAAG GCCGGGGATC TGCTGAAGGA GATGGGGTAT
GTGAAGAAGG GAGATTTCTT CGAGAAGGAT GGAAATACAC TGGAGGTGGA GCTTCTCGTC
ACATCGAGCA ATGAGCGCGC GGGCGAGATC ATAAAGAACG ACCTGGAGGA GGCTGGCATA
AAGGTCAACA TGCGCAGCGT CGACTCGAAG ACACTTGATA ACGCGGTCAA CGAGTGGAAC
TTCGATCTCG CGCTCAGCGG CCACGGCGGA ATGGGTGGAG ATCCCGAGAT ACTCAATCGC
ATAATAGGCG AGGGATACAC ATTTTGCAGC GATCGATACA TCGTGAACCA AACGCTAAAC
GATCTGCTGG ACCAAGAGGT TGCTGAAATG AACCCTGACA GGCGAAAGCA GATTGTAAAA
GAGATTCAGC TGGTCTACTC GCAGCAGTTG CCTTCGTTGC CATTGTACTA TCCTGAATCT
TTCTGGGCGC ATAATGGCAA GGTCGATCTG TATTACACTA AGAGAGGGAT CGCAAACGGC
ATACCCATAC CGCTGAACAA GCTATTATTT GCGAAGTAA
|
|---|
| Protein sequence | MAGLKDVLCT AILISLLLPA VAEEIPVYTI ADTTGDWGYP SPYLHYSRGP GYVRMSFIFD
TLVWKDQNGF VPALAESWEY LEGENAYLFN LNPNVKWHDG EPFTANDVVF TINYIKDHPY
QWVDSSIVDR AEKIDDHTVK IYLAKPYAPF LDQVAGTLPI LPEHIYSDVT NPEDFQDPKA
LTGTGPFKLV DYDKAQGTYL YEANEDYYQG APKVKQLKFV KLSSEMSGPA LKRGEVDATA
VPPEVADELR GSFVVLEGAH DWLAKLMINH KKEPFSDVRF RQALAYAIDR EKLVEIAQRG
YGVPASPGLF APDSEWCNPD VEQYEHDPEK AGDLLKEMGY VKKGDFFEKD GNTLEVELLV
TSSNERAGEI IKNDLEEAGI KVNMRSVDSK TLDNAVNEWN FDLALSGHGG MGGDPEILNR
IIGEGYTFCS DRYIVNQTLN DLLDQEVAEM NPDRRKQIVK EIQLVYSQQL PSLPLYYPES
FWAHNGKVDL YYTKRGIANG IPIPLNKLLF AK
|
|---|
| |