Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0745 |
Symbol | |
ID | 4462124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | - |
Start bp | 785504 |
End bp | 786826 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639699755 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_843175 |
Protein GI | 116754057 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.300133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGGT TTACCTACAC CTCGATACAT GCATGGAGCA TGTTCGGTGG CAAGGATCAC ATACAGGTCG TCAACGGTCA CCTCCACATT TCAGGTGCCG ACACAGTCGA GATAGCGAGG CGGTTTGGCA CCCCTGTTTA CGTCACATCA GAGGATCGGT TGAGGGAGAA CATTCGGAGG TATCACAGAG CTTTTCCAGA TGCTGATAAG TACTTCGCCG TGAAGGCGAA TGGCAACATC TCGATAATAA GAATTCTCGC GCAGGAGGGT GCAGGGGCTG ATGTCTTCTC CGCGGGAGAG CTTTACCTGG CCAGGCTTGC GGGTGTTCCC AGGGAGAGGA TACTCTTCAA TGGTAACTCC AAGAGGGATG AGGAGCTGAG GATGGCTGTG ACCTCAGGAG TTCGGGTCTC CATCGATTCT GAGGAAGAGC TGGAGAGCCT GAGCAGGATT GCATCCGAGG AGAGTAAGAA TGTGGAGATC CTCTTCAGGG TCAACCCTGA CATCTCGGTG AATACACATC CCAAGATAGC AACTGGCCTG AAGAGCTCGA AGTTCGGCAT ACCCGCGCAG TCTGTGAGGA GCATCTGCGA AAAGGCGATG CATATGGATG GCATTAAACC GATCGGTCTC CACTGCCACA TAGGATCCCA GATACTCGAT GTCTCGTCGT TTTCAGAGGC CGCCGCCAGG ATGATGGATC TGGTAGGGGA GATAGTCGAT ATCGGGGGTG ATATGGAACT CCTGGATCTC GGTGGTGGCC TTGGGATACA GTACGATCCT GCAGCGCCTC CAGCGCCGTC TCCAGAGGAT CTCGCGAATG CAGTGCTGCC TGTGATTGAG AGGAGATCTG AAGAGCTTGG CGTCAGGCTG AAACTGATTC TGGAGCCGGG AAGGAGCATC GTCGCGGATA CCACCATTTT GCTCACAGGG GTGAATGTTG TCAAAAGGGC CCACGTCACG TTTGTGGGTG TTGATGCCGG ATTCAATGTG CTTGCACGGC CGATGCTCTA CGATGCCTAC CATTACATCG TTGTGGCGAA CAGGGCAGAT GCTGAGATCT CTGAGAGATA CACGGTCGTG GGGCCGATAT GCGAGAGCGG AGATGTCCTC GCGCGCAATA GGGCGCTTCC TGTGGTGAAG AAGGGTGATA TTCTAGCATT TCTCGATGCA GGAGCATATG GATTTTCGAT GTCATCTCAG TACAACGGCC AGCCTAGGCC CGCGGAGGTT CTGGTTCGCG ATGGAGAGGT GGAGCTCATA AGAAAGGCGG AGGATATCAG CGCACTTCTG GCATGCCAGA TCATACCACC GAGGCTGATG TGA
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Protein sequence | MIRFTYTSIH AWSMFGGKDH IQVVNGHLHI SGADTVEIAR RFGTPVYVTS EDRLRENIRR YHRAFPDADK YFAVKANGNI SIIRILAQEG AGADVFSAGE LYLARLAGVP RERILFNGNS KRDEELRMAV TSGVRVSIDS EEELESLSRI ASEESKNVEI LFRVNPDISV NTHPKIATGL KSSKFGIPAQ SVRSICEKAM HMDGIKPIGL HCHIGSQILD VSSFSEAAAR MMDLVGEIVD IGGDMELLDL GGGLGIQYDP AAPPAPSPED LANAVLPVIE RRSEELGVRL KLILEPGRSI VADTTILLTG VNVVKRAHVT FVGVDAGFNV LARPMLYDAY HYIVVANRAD AEISERYTVV GPICESGDVL ARNRALPVVK KGDILAFLDA GAYGFSMSSQ YNGQPRPAEV LVRDGEVELI RKAEDISALL ACQIIPPRLM
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