| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0727 |
|---|
| Symbol | |
|---|
| ID | 4461878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 767803 |
|---|
| End bp | 769506 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699737 |
|---|
| Product | NAD+ synthetase |
|---|
| Protein accession | YP_843157 |
|---|
| Protein GI | 116754039 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.47874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACTG CTTTTAGTCC TGTCTTACGA GCAACTCGCC TGATCCAGAT TGGTATATAT
AAGACATGCG CATATGCCGG TACGATGAGA GTTGCTCTTC TCCAGATCAA TACAACCGTC
GGAGACCTCG AGGGTAATGC ATCTCTTATC AGAAAAGCGG TAGAGTCGCT TGATGCTGAC
CTGGCGGTAA CCCCAGAGAT GGCACTGGTG GGATACCCTC CGCGCGATCT TCTTCTGATG
CCTGGATTCG TGAAAAACGC CTGGGATGTT CTCACGCGGC TGGCACTCGA TCTCGAAGAT
TCACCACCTA TGCTTGTCGG GATACCGGAG CCGAACAGAT CCGAGACGGG AAGGCCGCTC
TTCAACTCTG CAGCTCTTCT CGCAGATGGA TCTGTGAAGC AGATCTTCCG CAAGACTCTG
CTCCCCACAT ACGATGTCTT CGACGAGGAC AGATACTTTG AGCCTGCATC AGGCCCGCAG
ATGCTGAACT TAAAGGGGAG GACATTCGGG ATATCCATAT GCGAAGACAT CTGGAATGAC
AGAGACATCT TCAGGCGCAG ACGGTACCAC AGGGATCCAC TGGAGGATCT CCGTGGCGCT
GACTGCTTCA TAAACATGTC AGCATCGCCA TTCACGGCAG GAAAGCATCT CAAAAGAGAG
ATGATGCTCA GCAGCATCGC CCGCAAGTAT GGTGTGCCGC TGATCTATGT GAACCAGGTC
GGGGGCAATG ACGACCTGGT CTTCGACGGC AGAAGCTGCG CCTTCTCTCC GTCAGGAGAG
CTAATCGCAA GGGCAGCGGC GTTTGAGGAG GATGTGCTCA TAGTGGACAT CGATTCCTGC
AGCGGATCTG TTTCCAGAGA CGACTTCTCC CCGGAGTCAG AGATCTGGAG GGCGCTTGTG
CTTGGCACCA GGGATTATGT TCGCAAGTGC GGGTTCAGGT CCGCTGTGAT CGGGCTCTCC
GGAGGAGTAG ACTCATCTCT CACAGCTGCA ATCGCTGCTG AGGCGCTTGG CCCTGAAAAC
GTGATCGGTG TTTTAATGCC CTCACCGTAC ACGAGCAGGG AGAGCATGGA GGATGCGCTG
GAGCTTGCGA GGAATCTATC CATACAAACC ATCACGATAC CGATAAGCGA GATAATGGCA
GCATATGAGC GCACGCTCGA GCCGATTTTC AGAGGCGTGG AGAAAGATGT GACCGAGGAG
AACATACAGG CCAGGATAAG GGGCAACCTG CTCATGGCGC TCTCGAACAA GTTCGGGCAT
ATCGTGCTCT CGACAGGGAA CAAATCAGAG CTCGCAGTCG GATACTGCAC GATCTACGGG
GATATGTCAG GGGGTTTCGC CGTGCTCTCC GATGTCCCAA AGACCATGGT CTACAGGATG
GCGAGATGGA TCAACATGAG AGGACCTGTT ATCCCGCAGA GTGTCCTCGA GAAGGCTCCA
TCTGCAGAGC TCAGGCCCGG CCAGCGGGAT CAGGATACTC TCCCGCCATA CGAGACCCTG
GACGAGATCC TGCACAGGCA CATAGAGCAG CGCCAGTCTG AGGAGGAGAT CGTGAGCGCC
GGTTTTGATC AAAAGATGGT GAGATACGTC CTGAAGATGG TCAAAACCGC GGAGTTCAAG
CGGAAACAGG CGCCTCCAGG AATCAAGGTC ACAGACCGTG CCTTCGGGAG CGGCTGGAGG
ATGCCGATAG CATACATGAT GTAA
|
|---|
| Protein sequence | MPTAFSPVLR ATRLIQIGIY KTCAYAGTMR VALLQINTTV GDLEGNASLI RKAVESLDAD
LAVTPEMALV GYPPRDLLLM PGFVKNAWDV LTRLALDLED SPPMLVGIPE PNRSETGRPL
FNSAALLADG SVKQIFRKTL LPTYDVFDED RYFEPASGPQ MLNLKGRTFG ISICEDIWND
RDIFRRRRYH RDPLEDLRGA DCFINMSASP FTAGKHLKRE MMLSSIARKY GVPLIYVNQV
GGNDDLVFDG RSCAFSPSGE LIARAAAFEE DVLIVDIDSC SGSVSRDDFS PESEIWRALV
LGTRDYVRKC GFRSAVIGLS GGVDSSLTAA IAAEALGPEN VIGVLMPSPY TSRESMEDAL
ELARNLSIQT ITIPISEIMA AYERTLEPIF RGVEKDVTEE NIQARIRGNL LMALSNKFGH
IVLSTGNKSE LAVGYCTIYG DMSGGFAVLS DVPKTMVYRM ARWINMRGPV IPQSVLEKAP
SAELRPGQRD QDTLPPYETL DEILHRHIEQ RQSEEEIVSA GFDQKMVRYV LKMVKTAEFK
RKQAPPGIKV TDRAFGSGWR MPIAYMM
|
|---|
| |