| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0721 |
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| Symbol | |
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| ID | 4461872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 759511 |
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| End bp | 761781 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639699731 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_843151 |
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| Protein GI | 116754033 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.117729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT CTGTGCGGCT GAAGGTTGCA GAGGCAGATC AAAGAGATGT GGGAAAGGGC
ATAGCCAGAG TCAGCGACGA CTTCATGAAG AGGATGGGCG TACGCCCGCT CGATGTTATC
GAGATAACAG GGGATAGGAG AACAGCAGCT CTGGTTGTGA GTGCTTACAG CGCAGACCAG
GGGCTGGATA TCATACGCAT GGACGGTCTG ATCAGATCGA ACGCCGGATC GAGCATAGGT
CAGTACGTGG AGGTGAGGAA GGCGGAGTGG TCTGAGGCAA AGCATGTGAC TCTTGCCCCT
GTGACGAAAG GTATGCAGAT CTTCGCTCCG AGCGAGGTGC TCACAAAGGT ATTCCAGGGA
AGACCGGTAT GCAAGGGTGA TATAATCTCG ACCACAAGTG TGCGAAGACC ACCATCAGAT
ACATTTGGCA GAGAGACGAT GTTCGAGGAG ATCTTTCGGG GTTTCCTCGG AGCGCAGGCG
TTCGGTTTGG GAGAGATCAA GCTCAGAGTT ATCTCCACAA ATCCGTCAGG GATCGTCAAG
ATAACCGATG CCACTGAGAT CGAGCTTCTT CCTCAGGCAG TAGAGGTCTC AGAGCGCCCG
GTGCCGTCTG TCTGCTACGA GGATGTTGGA GGGCTGAAGA ACGCCATAAC CAAGGTCAGG
GAGATGATTG AGCTCCCGCT GAAGCACCCG GAGCTCTTCG ATCGGCTGGG CATAGATCCT
CCTAAGGGTA TCCTCCTCTA TGGACCTCCA GGCACCGGGA AGACGATGCT CGCGAAGGCT
GTGGCGAATG AGAGCGATGC CTACTTCATC TCTGTTAACG GGCCTGAGAT AATGTCCAAG
TACTACGGCG AGTCGGAGAA GGCGCTGAGG GACATATTCG AGGAGGCTGA GAAGAACGCT
CCTGCGATAA TATTCCTGGA CGAACTGGAT TCGATAGCTC CGAAGCGCGG GGAGGTCACA
GGAGAGGTGG AGAGGCGTGT GGTGGCACAA CTCCTCTCGC TGATGGACGG TTTGAAGGAG
AGGAAGAACG TTCTCGTCAT CGGCTCCACC AACAGACCTG AGGCCCTGGA TATCGCCCTC
AGGAGGCCCG GAAGGTTTGA CAGGGAGATT GAGCTCGGAG TGCCGGATTT TGAGGGGCGA
AAGGAGATCT TTCAGATACA TACAAGAGGA ATGCCTCTCG CAGAAGATGT CAACATCGAG
GAGTTCGCAG AACTCACCTA TGGATTCGTG GGCGCTGACA TAGCAGCTGT GTGTAGAGAG
GCCGCCATGA ACGCTCTGCG CAGGATCCTG CCGGAGATAG ATCTGGATGA GCCGACAATA
CCCAAGGAGA TCCTCGACAG GCTCGTCGTC CAGAGAGTGG ATTTTGAGGC TGCCCTCAGG
GAGATACAGC CCTCTGCGCT GAGGGAGATA ATGGTTGAGG TCCCGAAGGT CACATGGGAT
GACATAGGTG GCCTTGAGGA TGTAAAGCAG CTCCTCATAG AGGCCGTAGA GTGGCCGCTC
CGCTACGCGA GCAACTTCAA GAGACTGGGC ATCAACGCGC CGAAGGGAAT ACTTCTCTAC
GGACCTCCAG GCACCGGGAA GACGATGCTC GCGAAGGCGG TGGCAAATGA GAGCGATGCC
AATTTCATAA CAGCAAAGGG GAGTGCGCTC CTCTCGAAAT GGTATGGAGA GAGTGAGAAG
CGGGTCGCAG AGATATTCAG AAAGGCCAGA CAGGTTGCTC CAGCTGTGAT ATTCCTGGAC
GAGCTCGATG CACTCGTTCC GGTCCGTGGC GGTGCGGTCG GCGAGCCTCA TGTCACGGAG
AGGATCGTGA ATCAGCTTTT ATCAGAGCTG GACGGCCTGG AGGAGCTCCA TGGTGTTGTG
GTAATAGGAG CAACGAACCG CCCGGATATC GTGGATCCGG CGCTTCTGAG GCCCGGACGC
TTCGACGAGC TGATACTAGT GCCAGTGCCT GACAAACCCT CGAGAAAGAA GATATTCGAG
GTCCACACGA GGAATATGCC TTTGGCTCCG GATGTTGATA TAGATGCGCT TGTTGAGCTG
ACAGAGCACT ACACTGGAGC TGATATAGCA GCTATATGCA GGAAGGCAGG CCGTTTGGCG
CTCAGAGAGA GCATGAGCTC GGAGCATGTC CGGGAGAGGC ACTTCCTTGC GGCAATTCGC
GAGATAGGGC CATCTGTTAC TCCGGACACC ATGAAGTACT ATGTGCGACT GGCAGAGTCG
CTGAGGAAGA AGGCATCCAG GGAGATAGAG CGCGGAGATA TGTACGTGTG A
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| Protein sequence | MSESVRLKVA EADQRDVGKG IARVSDDFMK RMGVRPLDVI EITGDRRTAA LVVSAYSADQ
GLDIIRMDGL IRSNAGSSIG QYVEVRKAEW SEAKHVTLAP VTKGMQIFAP SEVLTKVFQG
RPVCKGDIIS TTSVRRPPSD TFGRETMFEE IFRGFLGAQA FGLGEIKLRV ISTNPSGIVK
ITDATEIELL PQAVEVSERP VPSVCYEDVG GLKNAITKVR EMIELPLKHP ELFDRLGIDP
PKGILLYGPP GTGKTMLAKA VANESDAYFI SVNGPEIMSK YYGESEKALR DIFEEAEKNA
PAIIFLDELD SIAPKRGEVT GEVERRVVAQ LLSLMDGLKE RKNVLVIGST NRPEALDIAL
RRPGRFDREI ELGVPDFEGR KEIFQIHTRG MPLAEDVNIE EFAELTYGFV GADIAAVCRE
AAMNALRRIL PEIDLDEPTI PKEILDRLVV QRVDFEAALR EIQPSALREI MVEVPKVTWD
DIGGLEDVKQ LLIEAVEWPL RYASNFKRLG INAPKGILLY GPPGTGKTML AKAVANESDA
NFITAKGSAL LSKWYGESEK RVAEIFRKAR QVAPAVIFLD ELDALVPVRG GAVGEPHVTE
RIVNQLLSEL DGLEELHGVV VIGATNRPDI VDPALLRPGR FDELILVPVP DKPSRKKIFE
VHTRNMPLAP DVDIDALVEL TEHYTGADIA AICRKAGRLA LRESMSSEHV RERHFLAAIR
EIGPSVTPDT MKYYVRLAES LRKKASREIE RGDMYV
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