| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0648 |
|---|
| Symbol | |
|---|
| ID | 4463142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 681722 |
|---|
| End bp | 682798 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639699656 |
|---|
| Product | CRISPR-associated Cmr3 family protein |
|---|
| Protein accession | YP_843078 |
|---|
| Protein GI | 116753960 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1769] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR01888] CRISPR-associated protein, Cmr3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.845582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTATC TCAGAATCAC CCCGGTGGAT TCCTGGTTCT TCAGGGACGG AAGGCCGTTC
CATTTGGGAG AGGCGACATC AGACGTTGGG GGGCTCTTTC CCCCAAGCGC GTTCACTGTG
GTCGGAGCGA TAAGGGCGCA CCTCGCCCGG AGCATGGGCT GGCGTGAAGG GAAGTGGAGT
GAAGAGATCT GCAGGGTGCT CGGGGATGGG TATGATCTGG CTGGTCTCAG GTTCAGGGGA
CCGCTGCTCT GCAGGGAGGG AGATCGCGGT CCAGAGATGC TGTATCCAGC GCCGCTGAAC
CTACTCGGGA AGAGGAACGA CAGCGGGTAC GAGATGAGGC TACTCCGTCC CGGGGAGGAG
GTGGAGTGCG ATCTTGGAAG GGTCAGGCTT CCCACAGCGG AGAAAATCGA TGGCATGAAG
CAGCTGTCAG GATACGTAAA TGGAGATCAG CTGAAACAGG TATTGAGGGG AGAGGTTCCG
GAGGGACGGG TGATCCCGAG GGAGGAGTTA TGGGGGACGG AGTACGCTGT CGGTCTTGAG
AGAGAAAGGG ATACAAGAAC AGCTAAGGAA GCGCATCTTT ACTCGATAAA CAGGATCAGG
CTTGTGCGCG GAGTGCATCT GATCATGGGC GTTGAGGGGA TCGATGAGGG CCTCCTGGAA
AAGCTGGACG GCGCGGTGAT GCCCATCGGC GGAGAGGGGC GGATGGGGTG TGTCGAGATG
CTCAGCCCCG GAAAAGGCGT CTCTGAGATC AGGCAGGAGA TCGGGCCGAT CGACGGACGG
GTCAGATTCA CGCTGGTGCA TATCACCCCG GCGTTTCTGG GGAGGTGGCC CCGTCCGGGA
GAGAGCATCC CCGGGGTTCC TGGGGAGGTC GTATCAGCCT GCGTGGGGCG AGCCCTTCGC
ATCGGTGGCT GGGATTCTGT TAACAGGAGA CCTGTGGAGC TCAAGCCGTT CATTCCACCG
GGATCCGTCT GGTTCTGCGA GGCTGAGGCG GATGAGCTGA ACGATGTTAT GAGCGTGAGC
AGGATAGGAG AGTACACAGG ATTTGGTTTT GGAGAGATTG CTCTAGGCAT TTGGTGA
|
|---|
| Protein sequence | MIYLRITPVD SWFFRDGRPF HLGEATSDVG GLFPPSAFTV VGAIRAHLAR SMGWREGKWS
EEICRVLGDG YDLAGLRFRG PLLCREGDRG PEMLYPAPLN LLGKRNDSGY EMRLLRPGEE
VECDLGRVRL PTAEKIDGMK QLSGYVNGDQ LKQVLRGEVP EGRVIPREEL WGTEYAVGLE
RERDTRTAKE AHLYSINRIR LVRGVHLIMG VEGIDEGLLE KLDGAVMPIG GEGRMGCVEM
LSPGKGVSEI RQEIGPIDGR VRFTLVHITP AFLGRWPRPG ESIPGVPGEV VSACVGRALR
IGGWDSVNRR PVELKPFIPP GSVWFCEAEA DELNDVMSVS RIGEYTGFGF GEIALGIW
|
|---|
| |