| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0646 |
|---|
| Symbol | |
|---|
| ID | 4463140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 680509 |
|---|
| End bp | 680910 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639699654 |
|---|
| Product | CRISPR-associated Cmr5 family protein |
|---|
| Protein accession | YP_843076 |
|---|
| Protein GI | 116753958 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3337] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR01881] CRISPR-associated protein, Cmr5 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.643086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA GGAGTCTGGA GCAGGAGCGT GCGAAACATG CGCTGGAGGC TGTGAACTCC
ATCAGGGGTG AAAGCTGGGC GGGCAAATTC CGGAGCTATG TGGAGCGCCT GCCTCCTGCC
ATAGTGATGA ACGGCCTGGG CCAGGCGATG GCTGGCGAGC TTGCAGCTGC GGGCAGGGCG
GGGGAGATGA GTGACGACAA AAAAGCCCAT AACAAGCTCT ACGAGCTGGT CGCGGGCTGG
ATTCGCACGA GGAGAATCTA CTCAGCTGAG GAGAATCTGA TGAAGGCGAT TGTTGATGGC
GATCAGAAGC AGTACGTTCT CGCCCAGGCT GAGGCGCTGG CGTACCTTGA ATGGCTGAAG
AAGTTCAGCC AGGCCTTCCT GGAGAAGGAT AAGGAGGCGT GA
|
|---|
| Protein sequence | MSERSLEQER AKHALEAVNS IRGESWAGKF RSYVERLPPA IVMNGLGQAM AGELAAAGRA
GEMSDDKKAH NKLYELVAGW IRTRRIYSAE ENLMKAIVDG DQKQYVLAQA EALAYLEWLK
KFSQAFLEKD KEA
|
|---|
| |