| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0641 |
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| Symbol | |
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| ID | 4462281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 667609 |
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| End bp | 670023 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639699649 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_843071 |
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| Protein GI | 116753953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.674824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAGAG GGTCGTTTTC ATTTAAACTC AGATCCCATC CCGATAAGCT TCTGGTGGAT
CACCTCAGAA ACGTCGGGGA GATGTGCAGG AGGACAGTGG CTGAGAGCGC ACGGAACCTC
GATGATGCGG AGATTCTGAA GAATGTCGCA TACATCATCG GAGCGACACA CGATCTCGGA
AAGGCGACGG GCTTCTTCCA GGAGTACCTG AGGGAGACTG ATGAGAAAAG GAGGCGGGCT
CTGAGATCGA GAGATGTCAC GAAGCATGGT CTTCTCTCAT CGCTCTTCAC GTACGCAATT
GTCAGGGAGC ATCTGAGGAA GAGAGGATGC GAGATGCCCG GCGCACTTCC CCTGGTCTCA
TTCATCGCGG TGAGGCGCCA TCACGGGGAT CTGACGAACG CGCTGGATGA GATCTCGGCG
ATCTACGCTG AGAGGGAGAG GGTCCTATCT GTGATCGAGG AGCAGGTCTC CAGTCTTGAC
AGAAACGAAT GCGCGCAGAT ATTCAACGCC CTTCTCGGCG GTGTGGTTGA GATAGATCTT
GATTCTCTTT TGGACCACAT CCTCAGAGAT GCTCTGAAGG ATTTGAGGGG TGAGAAGCCG
CTTGTCAGGA ATCTCGGCAG GAGAAATGAT GTTCTGCCAT ACTTCGTGGC CCAGCTCCTG
TACTCCGCGC TTCTGGATGC GGACAAGACA GATGCAGGGC TGGAGGGCGT GGATCTGGGC
AGGGTGAATA TTCCTCCAGA TCTTGTGGAC AGGTACAGGG AGGCGCGCGG GTTCTCCGAG
AGGAGAGATG GCATCAATGG AATGAGGAAC GAGATATACC ATGATGCAGT CAGCCGGATC
TCAGGATGGG ACCTCAATGA GAGGATAATA TCGCTGAACG TGCCCACAGG TACAGGCAAG
ACGCTGACAT CCCTGGCGAT GGCGCTGCGG CTCAGGAGAA GGCTGATGAA CGAACGTGGG
GTCATGCCCA GGATAGTATA CGCTCTGCCG TTTCTCAGCA TAATCGATCA GACATGCGAT
GTCTTCGAGG ATGTGCTGGA AAGCGCGGGC ATCAGGGCTG ACTCAAGCGT GCTTCTGAAG
CACCATCATC TCTCCGACAT CACATACACA AAAGGGGATG AGGAATTCGA GTCTGACGTG
AGCCTTCTGC TGATGGAGGG ATGGAACTCT GAGATCGTGG TTACGACGTT CTGGCAGCTC
TTCCACACGA TATTCTCAAA CAGAAACAGA AGGCTTCGCA AGTTCAACAG GATTGCAAAT
TCAATAATAA TAATGGATGA AGTTCAGGCT GTGCCCCACA GGTACTGGCA TCTTCTGCAT
GATTCTCTGA AAATGCTCTG CGAGAAGTTC AACAGCTATC TGATACTCGT CACCGCGACC
CAGCCGCTGA TCTTCTCTGA GGAGAGCGGC GAGATCAGGG AGGCTGTGAG CGATAAGGAG
CGGTACTTCA GAGCGCTCAA CAGGGTTGAG CTGCGCCCCA TGATCGATGC TCCCATGAGC
CTGGAGGAAT TTGAGGCTCT TCTGGAGGGG GAGATTCACA ATAACCCGGA GAAGGATTTT
CTCATCGTGC TCAACACCAT CCGCTCAGCC AGGAATGTGT ACAGCGCCAT AAAAGCTCTT
GATCTGAGGG ATACAGAGCT GTTTTACCTC TCCACGCATG TCGTTCCCAG GGATAGAAGG
GATCGCATAC GCAGGATCAG AGATGAGCGT GGAGGGCGCA GGAAGATCAC AGTGAGCACG
CAGCTCATAG AGGCGGGTGT TGATATCGAT GCTGATATCG TGTTCAGGGA TCTCGCGCCC
CTCGACTCGA TAAATCAGGT CGCGGGAAGG TGCAACAGGA ACCTCTCGAA GGGCAGGGGG
CGGGTCTCAG TTGTCATCCT CAGGGATGAG CGGAGGGAGC TGTGCAGGTA CATCTACGAT
GGTTTTCTTA TCTCAAAAAC ACTTGACATA TTGAGGTCGT GCGGAGAATG CATAGAGGAA
AGGGAGATAC TGGAGCTGAA CAGCAGGTAC TTCAGGGTGG TGAGGAGCGG CATGAGCGAT
GAGACCTCCA GGAGGTGCAT GAGCATGCTA TCAGGCCTGG AGTTTGGAGA TCTCGGGGAG
AGCTTCAGGC TGATAGAGGA GGATGAGCCC AGGGTGGATG TTTTTGTGGA GACGGATGAG
AGGGCCTCTG ATGTCTGGCA GGCTTACAGA GATCTCAGAT CCGAGAGGGA TCTCTGGGAG
AGGAGAAGGA GATACCTGAG ACTTAGAAAC GCACTGAGCG ATTACATGAT CTCCCTTCCG
AGGAGACTCG CTGCGGATCT TGTCGTGGAG AATCAGGGCA CTGGCTACAT ATCGATGGAC
GAACTCCCTC ACTACTACGA TCCAGAGACC GGCTTCAGGG TGGAGGATGC TGGCGAGGGA
TCTATGATAA TCTGA
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| Protein sequence | MGRGSFSFKL RSHPDKLLVD HLRNVGEMCR RTVAESARNL DDAEILKNVA YIIGATHDLG
KATGFFQEYL RETDEKRRRA LRSRDVTKHG LLSSLFTYAI VREHLRKRGC EMPGALPLVS
FIAVRRHHGD LTNALDEISA IYAERERVLS VIEEQVSSLD RNECAQIFNA LLGGVVEIDL
DSLLDHILRD ALKDLRGEKP LVRNLGRRND VLPYFVAQLL YSALLDADKT DAGLEGVDLG
RVNIPPDLVD RYREARGFSE RRDGINGMRN EIYHDAVSRI SGWDLNERII SLNVPTGTGK
TLTSLAMALR LRRRLMNERG VMPRIVYALP FLSIIDQTCD VFEDVLESAG IRADSSVLLK
HHHLSDITYT KGDEEFESDV SLLLMEGWNS EIVVTTFWQL FHTIFSNRNR RLRKFNRIAN
SIIIMDEVQA VPHRYWHLLH DSLKMLCEKF NSYLILVTAT QPLIFSEESG EIREAVSDKE
RYFRALNRVE LRPMIDAPMS LEEFEALLEG EIHNNPEKDF LIVLNTIRSA RNVYSAIKAL
DLRDTELFYL STHVVPRDRR DRIRRIRDER GGRRKITVST QLIEAGVDID ADIVFRDLAP
LDSINQVAGR CNRNLSKGRG RVSVVILRDE RRELCRYIYD GFLISKTLDI LRSCGECIEE
REILELNSRY FRVVRSGMSD ETSRRCMSML SGLEFGDLGE SFRLIEEDEP RVDVFVETDE
RASDVWQAYR DLRSERDLWE RRRRYLRLRN ALSDYMISLP RRLAADLVVE NQGTGYISMD
ELPHYYDPET GFRVEDAGEG SMII
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