| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0640 |
|---|
| Symbol | |
|---|
| ID | 4462280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 666933 |
|---|
| End bp | 667634 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639699648 |
|---|
| Product | CRISPR-associated Cas5 family Hmari subtype protein |
|---|
| Protein accession | YP_843070 |
|---|
| Protein GI | 116753952 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0611844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGATA GCGTACTGGT CTTCGATGTG TGGGGGGATT ACGCGCACTT CAGGAAGATC
TACACAACCA GCTCTCCCCT CACGTACTCT TTTCCTCCAA GGACAGCGAT ATCGGGAATC
ATCGGGGCCA TAGCAGGGCT CAGCAAGGAG AGTTACTTCA GGTACTTTTC CAGGGATAAA
GCAAGCATCG GTTGCAGGAT CCTGGAGCCT GTGAAGAAGG TGCGCGTTGG CGAGAACCTG
ATCGACACAA AGAGGAGCAT GCACAGGATC CATAACAGGA CGCAGGTCAG GTTTGAGTTT
CTGAAGGATC CCAGGTTCAG GATATATCTC AGCCATTCTG ACGATCGCTT CTCACGGGAT
CTCAGGGATA TGCTGGAGGA TCACAGATGT GTGTACACAC CATGCCTGGG CCTGAGCCAG
CTAGTATGCA ACTTCAAATT CGTCGGCGAG CTGGGTTTGA GGAGATGCGG TGATGGATTA
CAGGAAATAA ACAGCGTTGT GCCTCTGAAA TCTCTTCTGG AGTCGCCGGA GTTTGAGGAG
GGCAGGGAGT ATTTCTCAGA GATCATGCCC TGCGTTATTG GAGAGGGACG GGAGGTCACG
GATTACAGTG AGGTGCTCTA CGAGAGGAAC GGAGGGAGCA TCAGGGCCAG AACAAGAGAT
GCGTGGGAGC TGGATAATGG GGAGAGGGTC GTTTTCATTT AA
|
|---|
| Protein sequence | MRDSVLVFDV WGDYAHFRKI YTTSSPLTYS FPPRTAISGI IGAIAGLSKE SYFRYFSRDK
ASIGCRILEP VKKVRVGENL IDTKRSMHRI HNRTQVRFEF LKDPRFRIYL SHSDDRFSRD
LRDMLEDHRC VYTPCLGLSQ LVCNFKFVGE LGLRRCGDGL QEINSVVPLK SLLESPEFEE
GREYFSEIMP CVIGEGREVT DYSEVLYERN GGSIRARTRD AWELDNGERV VFI
|
|---|
| |