| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0570 |
|---|
| Symbol | |
|---|
| ID | 4462464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 590575 |
|---|
| End bp | 591342 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639699576 |
|---|
| Product | methyl-coenzyme M reductase, gamma subunit |
|---|
| Protein accession | YP_843001 |
|---|
| Protein GI | 116753883 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4057] Methyl coenzyme M reductase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR03259] methyl-coenzyme M reductase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0298904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATACA CACCCCAATA CTATCCCGGC AACACCTCTG TTGGCGCCAA CAGAAGGAAG
CACATGTCCG GAAACCTCGA GAAGCTCAGA GATATTCCCG AGGCAGATGT AGTCGCTATT
ATGGGCCACA GGGCCCCAGG TGCCGACTAC CCGAGCACCC ATCCGCCACT GAAGGAGATG
GGTGAGCCTG ACTGTCCGAT AAGGCAGCTC GTCGAGCCCA CACCGGGCGC TGCGGCAGGA
GATCGCGTCA GGTATTCTCA GTTTGCTGAC TCGATGTACT TCGCCCCGTC GATTCCCTAC
TGGAGGTCCT ACTGGGCGGC TATCAACTGC AGAGGCGCGG ATCCAGGCAC CCTCTCAGGC
AGGCAGATCA TAGAGGCCCG TGAGAGAGAT ATCGAGGCGT ACACCAAGAA GCTTATGGAC
TCTGAGATGA CAGACGTCGC CAGGTGCTCC ATGAGGGGCT GCACGGTCCA CGGCCACTCC
CTGAGGCTTG AGGAGAACGG CCTGATGTTC GATATGCTGG CCAGGACCGA GCTGGGCGCC
GATGGCAACG TCTACTATGT CAAGGACCAG GTAGGCATAC CGCTGGACAA GAAGATCAAT
GTCGGCAAGC CGATGAGCGA GGATGAGCTC AAGAAGCGGA CGACGATCTT CAGGTACGAC
AACGTATCCT TTGGTGGTAA AGTGGGCGCC AGAAAGTTCG ACGAGGCGCT GGAGGCCCTG
CACCACATGT GGGAGTACAG GACAAAGTGG GGCTTCAGGC CGGAGTGA
|
|---|
| Protein sequence | MAYTPQYYPG NTSVGANRRK HMSGNLEKLR DIPEADVVAI MGHRAPGADY PSTHPPLKEM
GEPDCPIRQL VEPTPGAAAG DRVRYSQFAD SMYFAPSIPY WRSYWAAINC RGADPGTLSG
RQIIEARERD IEAYTKKLMD SEMTDVARCS MRGCTVHGHS LRLEENGLMF DMLARTELGA
DGNVYYVKDQ VGIPLDKKIN VGKPMSEDEL KKRTTIFRYD NVSFGGKVGA RKFDEALEAL
HHMWEYRTKW GFRPE
|
|---|
| |