| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0551 |
|---|
| Symbol | |
|---|
| ID | 4463011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 572532 |
|---|
| End bp | 573347 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699557 |
|---|
| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
|---|
| Protein accession | YP_842982 |
|---|
| Protein GI | 116753864 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.183762 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAAGG CAACTGAAGC GGTTGCATGC AAATCACAGA TCTCGCTGCC CGGATGGGTC
GTTCGCTTAA TAGAAAATGC CCTTCGCAGT GAGAGGAGCG AGATAGCCAG GTACCATTTG
AATGCAATAC TGAACAACAT ACGGATCGCT GAAGCTGATG CGCGCCCGGT ATGCCAGGAC
ACCGGCCTCC CCGTCTTTCA CGTGGAGATC GGGGAGGGAT GCTCGTTCGA CTTCAACCTG
TGGGAGGCGA TCGCTGAGGG AGTGACGATC GCGACCAGAA AGGGCATGTT GAGATCGAAT
GTGGTGGATC CGCTGAGCAG GTTGAACACA GGGGACAACA CAGGCCCTGG CATGCCGTAT
CTCATCGTGG ATCATGTCAC AGGAGATTCG CTCAGGATAA CCGCATTCCC GAAGGGAGCG
GGCTCCGAGA ACATGAGCTT TTTGGGGATG CTCAATCCCG CAGACGATCC ATTTGAATAC
ATTTTAGAGA ACCTCGCGGA GCGGGTATCG AACGCCTGCC CGCCTGTGTT TGTTGGAATA
GGGATTGGCG GGACATTCGA CCAGGCTGCG GCTCTCGCGA AGCGTGCGAT CATCGGCCTT
CCCGGAGAGA GCAAGGAGGA GCTGCTGCTT CTCAAAAGAA TCAACGATCT CGGGATTGGT
CCTATGGGTC TTGGAGGTGA CACCACCGCT CTTGGCGTGA AGATAGAGAG GGCGTTCTGC
CACACCGCAT CACTGCCTGT GGCTGTCAAC CTCCAGTGCT GGGCGAACAG AAGGGCGACT
GCCAGAGTGA CGGAGGATGG ATGGAGCATA GAGTGA
|
|---|
| Protein sequence | MVKATEAVAC KSQISLPGWV VRLIENALRS ERSEIARYHL NAILNNIRIA EADARPVCQD
TGLPVFHVEI GEGCSFDFNL WEAIAEGVTI ATRKGMLRSN VVDPLSRLNT GDNTGPGMPY
LIVDHVTGDS LRITAFPKGA GSENMSFLGM LNPADDPFEY ILENLAERVS NACPPVFVGI
GIGGTFDQAA ALAKRAIIGL PGESKEELLL LKRINDLGIG PMGLGGDTTA LGVKIERAFC
HTASLPVAVN LQCWANRRAT ARVTEDGWSI E
|
|---|
| |