| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0531 |
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| Symbol | |
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| ID | 4462723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 548299 |
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| End bp | 550458 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639699536 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_842962 |
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| Protein GI | 116753844 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family
[TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAGG AGGTAATTCT GAAGGTCGGA GAGGCAAGAG CCTCCGATGT TGGAAGAGGG
ATAGCACGAG TTGACCCCGC AGTTATAAAG GAGAGGGGCT GGCAGGCCGG GGACGTCATT
AGCATCAGGG GAAAGAAGCA GACTGCTGCG CTTCTCTGGC CGGGCTATCC GGAAGATACA
GGAACAGGCA TAATCAGAAT GGACGGCACG CTCAGGAGAA ATGCTGGGGT CACCATAGAT
GAGCGGGTCC CTGTGAGGAT CGTACAGGCT GCTCAGGCCG AGACTGTGGT CTTCGCTCCC
ACCGTTCCGC TCCGCATAAC AGGCGGAGAG GAGTACCTGA AGAGGTACAT GGAGGGCAGG
GTGATCTCAA GAGGAGATGT TATAGAGCTC AACGTCATGG GGCGCAAGAT CGATCTCGTC
GCTGTGAGGA TCACTCCTCC AAGAGATGCG CTTGTGATAG GGGACCGCAC CAAGATAGAG
ATCAGCGAGA AGCCGGCGAA GGAGGAGAAG ATGATACAGC GCGTGACCTA CGAGGACATC
GGCGGTCTGA GCGCTGAGAT CAAGAAGGTC AGGGAGATGA TAGAGCTCCC GATGAAGCAT
CCCGAGCTCT TCGAGCGGCT TGGCGTTGAG GCTCCGAAGG GCGTGCTCCT CCACGGTCCG
CCTGGCACCG GCAAGACCCT GCTGGCAAGG GCTCTCGCAT CCGAGACCAA CGCTCACTTC
GAGACCCTGA GCGGCCCTGA GATTATGTCC AAGTACTATG GCGAATCCGA GGAACGCCTC
AGGCAGCTCT TCAAGACCGC AGAGGAGAAC GCGCCCAGCA TAATACTCAT AGATGAGATC
GACTCGATCG CCCCCAAGAG GGAGGAGGTC ACAGGCGAGG TTGAGAGGAG AGTCGTGGCA
CAGCTCCTCG CGCTCATGGA TGGCCTCGAG TCGCGCGGCA AGGTCGTGAT AATCGGAGCC
ACAAACAGGC CGGATGCCCT CGATCCCGCG CTCCGCAGGC CGGGCAGGTT CGACCGGGAG
ATCGAGATCG GGGTGCCGAA CAGAGATGCC AGGCTGGAGA TCCTCCAGAT ACACACGAGA
GGCATGCCTC TGAGCTCTGA TGTGGATCTC GGAAAGCTTG CTGACATAAC CCACGGTTTC
GTCGGAGCGG ATCTTGCTGC ACTCGCAAGA GAGGCCGGCA TGCGTGCTCT GAGGCGTGTG
CTGCCGGAGC TGGATCTCGA GGTCGAATCC ATACCTGCTG AGATCCTGAA CAAGATCGAG
GTGACAATGG CGGACTTCAT GGACGCGCTG AGGGATCTCG AGCCATCCGC GATGCGTGAG
GTGCTTGTGG AGTCGCCAAA CGTCCACTGG AGCGATATTG GTGGCCTTGC ACAGGCGAAG
CAGGAGCTGA TGGAGGCTGT GGAATGGCCC CTCACCTACC CGAAGCTCTT CGAGCATATG
AAGGCCAGTC CGCCAAAGGG GATCCTCCTC TACGGACCGC CGGGCACGGG CAAGACGCTG
CTCGCAAAGG CCGTGGCGAC TGAGAGCCAG GCGAACTTCA TAAGCGTCAA GGGCCCAGAG
TTTCTGAGCA AGTGGGTTGG AGAGTCAGAG CGCGCCGTCA GGGAGACGTT CAGGAAGGCC
AAGCAGGCTG CGCCCGCGGT GGTATTCTTT GATGAGATAG ACGCCATCGC TCCCATGAGG
AGCTCCGGAG CAGCAGACTC ACATGTGACT GAGAGGGTGA TAAGCCAGAT ACTCTCTGAG
ATGGACGGGC TTGAGCCGCT GCACAATGTG ATAGTGATAG CGGCGACAAA CAGGCCTGAC
ATAATCGATC CAGCGCTCCT CAGGCCTGGC AGGTTCGACA GAATGATAGA GATCGGACCG
CCTGACGAGG AGTCGAGGCT GGAGATACTG AAGATACACA CCGCGAACAG GCCTCTCGCT
GAGGATGTTG ATCTCGCCGA GATCGCAAAG CGCACCGAGA ACTACAGCGG CGCGGATCTT
GCAGCAGTAT GCAGCGAGGC CGTGATGCTC GCGATCAGGG AGTACGTCCT CGCCGGCAAG
CCACAGGATG AGGAGGCGAT AAAGAACCTC AGAGTGGAGC GCAGGCACTT CGAGGAGGCG
CTGAAGAAGG TCAGGCCGAG CCTGAAGGAT GTGCGAATGC AATACACTCT CCCGAGATGA
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| Protein sequence | MTEEVILKVG EARASDVGRG IARVDPAVIK ERGWQAGDVI SIRGKKQTAA LLWPGYPEDT
GTGIIRMDGT LRRNAGVTID ERVPVRIVQA AQAETVVFAP TVPLRITGGE EYLKRYMEGR
VISRGDVIEL NVMGRKIDLV AVRITPPRDA LVIGDRTKIE ISEKPAKEEK MIQRVTYEDI
GGLSAEIKKV REMIELPMKH PELFERLGVE APKGVLLHGP PGTGKTLLAR ALASETNAHF
ETLSGPEIMS KYYGESEERL RQLFKTAEEN APSIILIDEI DSIAPKREEV TGEVERRVVA
QLLALMDGLE SRGKVVIIGA TNRPDALDPA LRRPGRFDRE IEIGVPNRDA RLEILQIHTR
GMPLSSDVDL GKLADITHGF VGADLAALAR EAGMRALRRV LPELDLEVES IPAEILNKIE
VTMADFMDAL RDLEPSAMRE VLVESPNVHW SDIGGLAQAK QELMEAVEWP LTYPKLFEHM
KASPPKGILL YGPPGTGKTL LAKAVATESQ ANFISVKGPE FLSKWVGESE RAVRETFRKA
KQAAPAVVFF DEIDAIAPMR SSGAADSHVT ERVISQILSE MDGLEPLHNV IVIAATNRPD
IIDPALLRPG RFDRMIEIGP PDEESRLEIL KIHTANRPLA EDVDLAEIAK RTENYSGADL
AAVCSEAVML AIREYVLAGK PQDEEAIKNL RVERRHFEEA LKKVRPSLKD VRMQYTLPR
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