Gene Mthe_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0515 
Symbol 
ID4463428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp528052 
End bp529308 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content54% 
IMG OID639699519 
Productmajor facilitator transporter 
Protein accessionYP_842946 
Protein GI116753828 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA ATGTGGAATT CAAGGAGCCG CCAGGAGGCA GATGGGTCCT TGTCATATTG 
GGGATGATAA TAAACCTCTG TCTAGGCAGC GTTTATTCCT GGTCGGTATT CGTTAAGCCC
CTGACCGACC ACTTCCAGGC GATGGGACAG GTGGTGAGTG CAAACGATGT GCTGCTGCCA
TTCTCGATAT TCCTGGCAGT CTTCGCCATA GCGATGCCTT TGTCAGGCAA GTACATCGAG
AAGTACGGTC CACGAAAGGT CACTATGGTG GGTGGTGTGC TCTGTGGACT GGGGTGGCTG
CTGGCCTCGA CAGCAAGCAG CGTGCAGATG CTGTATCCCA CATACGGAAT CATAGGCGGG
CTGGGCGTCG GAATAGCATA TGGGTGTCCA GTAGCAGTAG CTGCCAGATG GTTCCCCGAC
AGGCGCGGCC TCGCGGTGGG TCTGACTGTG CTTGGATTCG GCTTTTCAGC GTTCTTCACC
GCAAATATAG CCGGATACCT CATTGCTGCT CAGGGCGTTA TGAACACATT CAGGGTATTC
GGTGTGGCGT TCATTATAAT AATCGTCCTG CTCTCAATGC CGCTGGTATT CCCACCGGCT
GGATACAAGC CCCCTGGATG GACGCCCCCT GCTCCAAAGC CTGGCGCAGC CGTCACCCAC
GAGTTCAGAA GAGAGGAGAT GCTCAAGACG CCGACGTTCT ATGGTCTCTG GCTCTGTTAC
TTCATCGGAT GTCTTGCAGG ACTAATGGCG ATAAGCGTAT CAAAGCCGGT TGGCACTGAG
ATCGTCCAGA TCGACCCAGA GCTTGCAACA TTCCTGGTGG GATTCTTTGC CATATTCAAT
GGTGGTGGCA GACCTCTCTT CGGCTATCTC ACCGATAAGC TGACTCCGAG GAACGCAGCG
ATAGTATCGT TCGTGCTGAT CTTCATCGCA TGCATGATGA TGGCCACAAT GGCCAAGCCC
ACTGCCTCTG AGATATACGT TGTTGCGTTT GCTGCTCTAT GGCTCTGTCT GGGTGGCTGG
CTGGCAATAG CCCCGACATC GACTGCCACA TTCTTCGGAA CCACGGATTA TCCGCGCAAC
TATGGTGTTG TTTTCCTCGC ATATGGTGCT GGTGCGATAG TCGGTCCGCA GCTCGCTGGC
TTCATCAAAA CGTCCACTGG AAGCTATATG GGTGTCTTCA ACTACGTGGC GGCCCTTGCC
ATAATCGGTA TCATCATAGC GTATGTTCTG ATGAGGCCTC CGAAAAAGCC AGAATGA
 
Protein sequence
MAENVEFKEP PGGRWVLVIL GMIINLCLGS VYSWSVFVKP LTDHFQAMGQ VVSANDVLLP 
FSIFLAVFAI AMPLSGKYIE KYGPRKVTMV GGVLCGLGWL LASTASSVQM LYPTYGIIGG
LGVGIAYGCP VAVAARWFPD RRGLAVGLTV LGFGFSAFFT ANIAGYLIAA QGVMNTFRVF
GVAFIIIIVL LSMPLVFPPA GYKPPGWTPP APKPGAAVTH EFRREEMLKT PTFYGLWLCY
FIGCLAGLMA ISVSKPVGTE IVQIDPELAT FLVGFFAIFN GGGRPLFGYL TDKLTPRNAA
IVSFVLIFIA CMMMATMAKP TASEIYVVAF AALWLCLGGW LAIAPTSTAT FFGTTDYPRN
YGVVFLAYGA GAIVGPQLAG FIKTSTGSYM GVFNYVAALA IIGIIIAYVL MRPPKKPE