Gene Mthe_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0501 
Symbol 
ID4463248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp513323 
End bp513913 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content52% 
IMG OID639699504 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_842932 
Protein GI116753814 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGATCG TCCTTGGGAT AAGTGGCGCT TCTGGTGTTG TGTATGGTAC AAGACTGCTT 
GAGGTTCTGC GTGAGCGCTG TTTTGTCAAC CTGATAGTCA CCGAGGCTGC AAGAAAGATC
CTGGAGATAG AGTGCGATAG ATCCTACAAG GATATCATCT CTCTGGCAGA TCGCGTGTTC
GAGCCGGGCG ACCTCACAGC GCCCATTGCA AGCGGCTCGT ATCTCTTCGA TGCTATGGTT
GTGGCCCCAT GCAGCATGAG AACTATGGCA GCGATAGCCT ATGGTATGTC TGACACGCTC
ATCACAAGGG TAGCTGATGT CTGCCTGAAG CAGCGAAGGC CGCTCGTGCT GGTGCCCAGA
GAGTCTCCAC TGAGCCTCAT ACATCTGAGA AACATGGTTG CAGTCTCGGA GGCAGGGGGT
ATTGTACTTC CAGCATCCCC CTCTTTCTAT TCCAGGCCTC TAAAAGTCGG GGATCTGGTG
GACACTGTGG TGTGTAGGAT TCTCGACATT CTGGGGATAG ATAACAGCAT ATCGCCCAGA
TGGGGCGGTT TCGGTGGAAA TGCTTATAAT GATACGGGTG AAGAGCAATA A
 
Protein sequence
MEIVLGISGA SGVVYGTRLL EVLRERCFVN LIVTEAARKI LEIECDRSYK DIISLADRVF 
EPGDLTAPIA SGSYLFDAMV VAPCSMRTMA AIAYGMSDTL ITRVADVCLK QRRPLVLVPR
ESPLSLIHLR NMVAVSEAGG IVLPASPSFY SRPLKVGDLV DTVVCRILDI LGIDNSISPR
WGGFGGNAYN DTGEEQ