| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0443 |
|---|
| Symbol | |
|---|
| ID | 4462582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 457341 |
|---|
| End bp | 458408 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639699445 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_842874 |
|---|
| Protein GI | 116753756 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGCA TGGAATCAAG GATCGCCCTG AAGGAGGAGT ACACCAGATT CGTGGGGAGG
AAGCTGCTGT TCATGGCAGC CCTCTCCCTG AGTATAGTGA TAATAGCAGG GATATCCGCG
ACACTGGGTT CTGCGAACCT CTCTGTTTTC GAGGTCTACA GCGCGATACT CGCCAGGGCG
TTCCCAGGAT ATTTCGAGAC GACCTGGTTT GCGGATACGA TTGTGTGGGG ATTGAGGCTC
CACAGGATTC TGATGGGCGT GGTGGCAGGC GCCGGGCTCG GTGTCGCGGG TGCTGCGATG
CAGGGCATAC TGAAGAATCC GCTGGCGAGT CCGTTCACGC TCGGGATATC ATCAGCAGCA
TCGTTTGGTG CAGCGCTCGC CATAATTCTT GGAGCCGGGT TTGCGGGCGG CGAGTACCTG
ATAATAGGAA ACGCGTTCGT CTTCACGCTA CTTGCAACCT TTGCGGTTTA CGGTCTGGCC
AAGTACAAGG GTATAACGCC CGAGACGATG ATCCTCGCGG GCATCGCGAT CATGTACTTC
TTCTCAGCGA TGACATCCTT TCTCCAGTAT GTTGGGAGAG CGGAGCAGGT CCAGGAGGTT
GTGTTCTGGA TGATGGGCTC GCTCGGAAGA TCATCATGGG ATAAGGTCTA TGCATCAGCG
CTTATGATTA TCATCTGTCT TCCGTATCTG ATCCTGAAGT CGTGGGACAT AAACGCGATA
GGGGCGGGCG ATGAGACCGC GAAGAGTCTG GGGGTGAATG TTGAGCGGAT ACGTGTTCTC
TCCATGATCT TTGCATCTCT CATTACAGCA AGCGTGATAT GCTTCACGGG CACCATCGGC
TTCATAGGTC TCGTGGCGCC GCACATGACC AGGATGGTCA TAGGCGGAGA TCACAGGTTT
CTTATCCCTG GATCCGCGCT CATGGGCTCT GTTATACTCC TCGCAGCCGA TACGCTCGCG
AGGACTGTTC TCGCACCGGT CATACTGCCC GTTGGAATAA TGACATCATT CCTGGGAGTG
CCGTTCTTCG TCTATCTCTT CATGAAAAGG AGGAAGGAGT TTTGGTGA
|
|---|
| Protein sequence | MDCMESRIAL KEEYTRFVGR KLLFMAALSL SIVIIAGISA TLGSANLSVF EVYSAILARA
FPGYFETTWF ADTIVWGLRL HRILMGVVAG AGLGVAGAAM QGILKNPLAS PFTLGISSAA
SFGAALAIIL GAGFAGGEYL IIGNAFVFTL LATFAVYGLA KYKGITPETM ILAGIAIMYF
FSAMTSFLQY VGRAEQVQEV VFWMMGSLGR SSWDKVYASA LMIIICLPYL ILKSWDINAI
GAGDETAKSL GVNVERIRVL SMIFASLITA SVICFTGTIG FIGLVAPHMT RMVIGGDHRF
LIPGSALMGS VILLAADTLA RTVLAPVILP VGIMTSFLGV PFFVYLFMKR RKEFW
|
|---|
| |