| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0406 |
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| Symbol | |
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| ID | 4462600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 416488 |
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| End bp | 417363 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639699410 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_842839 |
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| Protein GI | 116753721 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0163374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTTT GGTCTGAGGG TGTTATCTTG GTGAGATTTG GCGTGCATAT ATCGATAGCT
GGTGGCATTC ACCTCTCTGT GAGGAGGGCG ATCGAGCTTG GATGTGATAC ATATCAGATA
TTCACATCGA ATCCGAGAGG CTGGCACACA AAGCAGCTCT CAGATGATGT CATAGAGGCC
TTTAAAAGCC AGCTCAGCCG CTCGGGAATA TGGCCGGTTG TGGGACACAT GCCATATCTT
CCTAATCTGG CCTCCCCCAG GGAGAGCGTT TATTCCAGAT CGGTACAGGC ACTGAAGGAT
GAGCTGATGA GATGCAGCGC CCTGGGGATT CCGTATCTGG TAACGCACAT GGGAAGCCAC
CTGGGTTCTG GCAGAGATTC AGGCATATCC CGCATAGTCG GCGCGATCGA GGCCGCACTC
CCTGATTCAA ATGGCACAAA GATCCTTCTG GAGACAACAT CTGGATCAAA AAACAGCATC
GGTGGCAGGT TCGAAGATCT TGCTGATGTC CTGGAGAGGG TTGGGTCGGA TCTACTCGGC
ATCTGCCTTG ATACTTGCCA TGTATTCGCT GCCGGATACG ATCTCAGGGA CGAGAAAAGC
CTGGATGCAA CCCTGAGAGC ATTCGACAGC ACCGCTGGAC TGAAAGACCT CATGCTGATC
CATCTCAACG ACTCGGTGGG CGATCTCGGA TCTGGCCTGG ACAGGCATGA GCACATCGGC
ATGGGCAAAA TCGGATTGAA CGGATTCGCA GCGGTGATAA ACGATTACCG CCTCAGAGAG
CTGCCCATGA TACTGGAGAC GCCTGTCGAT AAGAGGAGAG ACGATCGTGG GAATCTCGAG
GTCGTCCGTG GAATCAGCCG AATAGTGCCC TCATGA
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| Protein sequence | MSVWSEGVIL VRFGVHISIA GGIHLSVRRA IELGCDTYQI FTSNPRGWHT KQLSDDVIEA
FKSQLSRSGI WPVVGHMPYL PNLASPRESV YSRSVQALKD ELMRCSALGI PYLVTHMGSH
LGSGRDSGIS RIVGAIEAAL PDSNGTKILL ETTSGSKNSI GGRFEDLADV LERVGSDLLG
ICLDTCHVFA AGYDLRDEKS LDATLRAFDS TAGLKDLMLI HLNDSVGDLG SGLDRHEHIG
MGKIGLNGFA AVINDYRLRE LPMILETPVD KRRDDRGNLE VVRGISRIVP S
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