| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0325 |
|---|
| Symbol | |
|---|
| ID | 4463302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 326083 |
|---|
| End bp | 327411 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639699329 |
|---|
| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
|---|
| Protein accession | YP_842759 |
|---|
| Protein GI | 116753641 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAAGA GGGGAAGATC CAGATTTCCG GCCACAGCTC TTATCCGGGC ACATCCCCAC
TCCCCCAGAG TTAAAACTTT AAACAGCGTC GGCATAGCAA CATACATGAG CGCAGCTGAC
GAGATGTTCG ACCCTGAATA CATGCTGGAT CTCCTCAGAG ATCTCATAGC CTTCAGGACG
GTTGCACCAC CTGGGAGCTT CTACCATGAG ATAGTGGATT ACCTCGTACC GGTGCTCAAT
GATATGGGAT TTGCGACGAA GAAGCTTGTG ATGCCTGCAG AGGTCTTCGA GTCAAAGTGC
ACCGATCCCA GACTCTCAGG GGATAGAGTC AACCTGATCG CAGATATGGA TCTCAGGAGG
CCAGAGTGGC TAGTGATATA TACACACCTC GACGTCGTAC CTCCAGGCGA CGGATGGTCC
ACAGATCCAT TCTCGCTCAC GATCAGGGAT GGCAGAGCAT ACGGCAGGGG AGTCTCGGAC
TCGAAGGGGG CTGTCGCGGC GATGATCGCC GCCCTCAGGG GCATTCTCAG AGAAAGAAAG
CCGAAGTACA ACCTTCGCCT GCTTCTGACG ACCGATGAGG AGGTTGGCGG CTACTCCGGG
CTGTGCTATC TTGCAGATTC CGGAATGGTG AAGGGGGACA AGATGCTCTG CATGGATGGG
TTCTCCGATG ATGTTGTGAT CGGCTCGAAT GGCATTATCA CATGGGAGGT CACGGTGAAT
GGGAGAGCGG CGCACAGCGG ATCCAGCTTT CTCGGAGATA ACGCGATCGA GAAGTCGCTT
CCTGTGATCG ACGCAATACT CCGACACAAG AGGGAGGTTG AAAAGAAAAG CTCCTCGCTT
CCAGCCAGCT CTGTGCTAAG GGATAAAGGG ATCGCACACA TGATGCCGAT ATTGAACATA
AATGTGATAC ATGGCGGCAT TAAGGAGAAC ATAGTCCCCG ACAGATGCGT CTTCCGAGGA
GACAGGCGGG TGATCCCGGA GGAGAGGATG GAGGATGCCA TGAGTGAGCT TGAGGAGATA
GTCAAACGCT TCGGCTCCGA CATCGACATA AGAATGTGGC CTGGGTATCC TCCCATGAGG
ATGGACCCGG AGCATCCGTG GGTTCTTGAG GTGAAGGAGG CTGTGAGAAG AGCAACGGGA
ACGGAGCCTC ATCTGTCCGG GACGCAGGGG AGCCTGGACC AGGCGTATGC AACAGAGATC
ACAAAGATCC CTGCAGCGGT CTACGGTGTC GGGAGGCAGC TCGAGAGCAA TGCACATGGA
ATCGATGAGA ACGTGAGTGT CGAGGATCTC GTGAGCTACA TGCGGTTCGT CGGGGAGCTT
CTGCTCTAG
|
|---|
| Protein sequence | MQKRGRSRFP ATALIRAHPH SPRVKTLNSV GIATYMSAAD EMFDPEYMLD LLRDLIAFRT
VAPPGSFYHE IVDYLVPVLN DMGFATKKLV MPAEVFESKC TDPRLSGDRV NLIADMDLRR
PEWLVIYTHL DVVPPGDGWS TDPFSLTIRD GRAYGRGVSD SKGAVAAMIA ALRGILRERK
PKYNLRLLLT TDEEVGGYSG LCYLADSGMV KGDKMLCMDG FSDDVVIGSN GIITWEVTVN
GRAAHSGSSF LGDNAIEKSL PVIDAILRHK REVEKKSSSL PASSVLRDKG IAHMMPILNI
NVIHGGIKEN IVPDRCVFRG DRRVIPEERM EDAMSELEEI VKRFGSDIDI RMWPGYPPMR
MDPEHPWVLE VKEAVRRATG TEPHLSGTQG SLDQAYATEI TKIPAAVYGV GRQLESNAHG
IDENVSVEDL VSYMRFVGEL LL
|
|---|
| |