| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0317 |
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| Symbol | |
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| ID | 4463295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 317030 |
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| End bp | 318238 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639699322 |
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| Product | TraB family protein |
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| Protein accession | YP_842752 |
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| Protein GI | 116753634 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0914094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA TAACAGAAGG ATCATCGACG GATGCAAGAA ACGAGATCTT GGTCATAGGC
ACCGCACACG TATCAGAAAA AAGCGTTGCC GAGGTCAGAG AGGCCATAGA GCAGACCAGG
CCGGATATCG TGGCGGTAGA GCTCTGCCAG AGGCGGTATC TCGCGCTGAC AGGCCAGGAC
AGAGATGAGG ATATAAAGGT AAGCGAGCTT CTGAGCGGCG GGAGGATCTA TCTAGTTCTG
GTCCAGTGGC TCCTCGCATA CATCCAGAGG CAGATAGGCT CTGAGATGGG TGTCAGGCCA
GGAGCTGAGA TGCTTGCTGC CATAGAGGCT GCCAGAGTGG TCAACGCGAG AGTCGCCCTG
GTCGACAGGG ATATCAGCAT AACCATTCAG CGGTTCTGGT CGGCGATGAG CATCTGGGAG
AAGCTGAAGA TGCTCTGGAG CCTTGTTGTG GCTGCCCTGG GCTTTGGAAA GGAGGATCTC
GATATAGACA GCGTCACGGA CTCGGATGTG GTATCCCAGC TCATGGCCGA GTTCAGGAAG
ATCGCGCCGT CCGCTGCCAG GGCGCTGGTC GACGAACGGG ATGCATACAT AGCCAGGAAT
CTTTATGACC TGTCGAGATA CGGAAAGGTC CTCGCGGTCG TGGGCGCCGG CCACCGTGAG
GGCATAATGC GCTACCTCTC AGATCCATCG AGAATACCGG ACACGCAAAT CTTCGACGCG
CCTCCTGAAA AGAGATTCAG CCTGGGCAAG GCGTTTGGCA TCATTGTTAC ACTGCTAATC
ATCCTCACGT TTGTATACAT CCTGGTCGCA GGATACTCGA GCGGTGTCGT GCTCCTGGCG
TTTGGCATAT GGTTCCTGGT GACCGGCGGA CTTGCAGCGC TGGGAGTCGT GGCTGCAAGA
GGTCATCCTC TGTCCGTCCT CACAGCATTC ATGATCGCCT GGATGACGAC TCTGAACCCT
CTGGTGGCTG CAGGATGGTT CGCCGGGATG GTCGAGGCAT GGAAGCGGAA GCCGACGATG
GGGGATGTGA AGAGGCTGGC AAGTGCTGAG AGCATGGATG AGATGATGGA GAACCGCTTC
TTCCGTGTGG TGCTTGTTGC AGCCCTCGCA AACCTCGGCG CAACCCTGGG CACGTTTCTC
GGAATATACA TAATATGGCA GCGGATGGGC CTCATAGATC CGCATGCCAT TATTAGTCAT
ATAATATGA
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| Protein sequence | MADITEGSST DARNEILVIG TAHVSEKSVA EVREAIEQTR PDIVAVELCQ RRYLALTGQD
RDEDIKVSEL LSGGRIYLVL VQWLLAYIQR QIGSEMGVRP GAEMLAAIEA ARVVNARVAL
VDRDISITIQ RFWSAMSIWE KLKMLWSLVV AALGFGKEDL DIDSVTDSDV VSQLMAEFRK
IAPSAARALV DERDAYIARN LYDLSRYGKV LAVVGAGHRE GIMRYLSDPS RIPDTQIFDA
PPEKRFSLGK AFGIIVTLLI ILTFVYILVA GYSSGVVLLA FGIWFLVTGG LAALGVVAAR
GHPLSVLTAF MIAWMTTLNP LVAAGWFAGM VEAWKRKPTM GDVKRLASAE SMDEMMENRF
FRVVLVAALA NLGATLGTFL GIYIIWQRMG LIDPHAIISH II
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