| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0254 |
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| Symbol | |
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| ID | 4462077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 250381 |
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| End bp | 252213 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639699260 |
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| Product | glycogen debranching enzyme, putative |
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| Protein accession | YP_842691 |
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| Protein GI | 116753573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.735444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCCT ACAGTGATGG GATATCCAGG GAATGGATTG TGACAAATGG AATTGGAGGA
TATGCATCGT CCACATCCAT TGGTGCAAAC ACCAGGGCGT ATCACGGCCT TCTGATAGCA
TCGCTCAGTC CGCCGGTGGA CAGATGGCTT CTGCTCTCCT CTCTTGATGA GACCGTTAAC
GGTATCGAGC TGGCAAACCA TCAGTATCCA GGTGTGGTGC ACCCACGAGG GTTCATGTAT
CTTGAATCAT TCACTGCAGA GCCTGTGCCC ACATATCTAT ACAGAGCGAA CGGTATCGAG
GTCGTAAAGC AGATCTTCAT GGTCCATGGG GAGAACACGA CTGTTGTGAA GTACCACATC
TCTGGAGATT CTCATATCAG GATCATGCCC CTTGTCACAT CGAGGTGCTT CCATGCTGTT
TCGGGCAGGC CAGAGATACG CCAGGAGATT ATGGAGAGGG GCACCCTTCT TAGATCGAGA
TGCAATCTCC ACCTTTTCTC AGACCGCGCG AGGTACGTGA GAAACGAGGT CTGGTACCAC
AACTTTGAGT ATGAGATCGA GAGGGTGCGC GGGCTGGGCT GGGTGGAAGA CCTCCTCTGC
CCGGGGTGGT TTGAGGCTGA TGTGGAGAAC GAGCTGGATC TCTGCATTAC CGCATCCACG
AGGATGGTTG ATGCAGACGA CTCGGTATTA ACGGATGAGC TGAAAAGACA GAGCAAACTC
CTTTCCACAC TTCCTGAGGA GATGAGGTCG CTCGCTATCG CTGCAGATAG CTTTCTGGTC
CGTCGCGGCA GCGGCATGAG CATCATCGCT GGGTACCACT GGTTCGACGA CTGGGGGAGG
GATGCCATGA TCGCCCTTCC TGGTCTTCTC CTCTGCACTG GCAGGTTTGA TGATGCCAGA
GCGGTGCTCA GAACATTCTC AGAACAGATG CAGGATGGCC TGATTCCAAA CGATCTGGGG
GCAGGCTCTT ACAACACGGT GGATGCGTCA CTGCTCTTCA TAAGAGCTGT GTGTGAGTAC
CACAGGTTCT CCTCGGATTC ATCTTTTATC AGAGAGCTCT GGCCCACGCT GATGGGCATC
ATCGAATGCT ACACCACCAT GACGCCTGTG GGATACATGG ACTCCGATTG TCTCATATCA
TCCTCAGAGG GCGCGACCTG GATGGACGCG CGAGTTGATG GCCGGTGCGT TACTCCCAGG
GCTGGAAAGT GCGTCGAAGT GAATGCGCTC TGGTACGAGG CCTTGAGGTC TCTGGAGGAG
CTCAGCGAAG CCGCAGGCCT GGAGTGGAGG TGGCACGGCC TGGCAGAACG CGTCAGGCGC
TCATTCAGGC GGTTCTGGAA CCCTGCGGGT TATCTTTACG ATACAATAGA TCCATATGAT
GGGTCGGTGA GACCGAATCA GGTCGTAGCT GTCGCGTTCT CCCACGGGCT TTTATCGCTG
GAACGGACGC GTGCGGTTGT GAGAAATGCG ACTGAGGAGC TTCTCACCCC CTATGGTCTC
AGAACCTTAT CTCCCAGAGA TCCGGCCTAC ATCGGGCGCT ACGAGGGCTC CCCCAGAGAG
AGGGATCAGG CATACCATCA GGGCACCGTC TGGCCGTGGC TGATCGGGCC GTACATCACC
GCTTACCTCC GAGCGAGCAG GTACAGCAAG AGGAGCAGGA TGCACGCGAT CTCTCTCCTC
AGACCTCTCC TCGAGGAGCG CCGCTACGGC ATTGGAACCA TCGCAGAGGT GTACGATGGC
GATCCGCCGC ACAGGCCTGG CGGATGCATA TCACAGGCAT GGTCTGTGGC CGAGGTGATA
CGCGCGTTCC TCGAGGCGAG GGACGGAATC TAG
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| Protein sequence | MIPYSDGISR EWIVTNGIGG YASSTSIGAN TRAYHGLLIA SLSPPVDRWL LLSSLDETVN
GIELANHQYP GVVHPRGFMY LESFTAEPVP TYLYRANGIE VVKQIFMVHG ENTTVVKYHI
SGDSHIRIMP LVTSRCFHAV SGRPEIRQEI MERGTLLRSR CNLHLFSDRA RYVRNEVWYH
NFEYEIERVR GLGWVEDLLC PGWFEADVEN ELDLCITAST RMVDADDSVL TDELKRQSKL
LSTLPEEMRS LAIAADSFLV RRGSGMSIIA GYHWFDDWGR DAMIALPGLL LCTGRFDDAR
AVLRTFSEQM QDGLIPNDLG AGSYNTVDAS LLFIRAVCEY HRFSSDSSFI RELWPTLMGI
IECYTTMTPV GYMDSDCLIS SSEGATWMDA RVDGRCVTPR AGKCVEVNAL WYEALRSLEE
LSEAAGLEWR WHGLAERVRR SFRRFWNPAG YLYDTIDPYD GSVRPNQVVA VAFSHGLLSL
ERTRAVVRNA TEELLTPYGL RTLSPRDPAY IGRYEGSPRE RDQAYHQGTV WPWLIGPYIT
AYLRASRYSK RSRMHAISLL RPLLEERRYG IGTIAEVYDG DPPHRPGGCI SQAWSVAEVI
RAFLEARDGI
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