| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0247 |
|---|
| Symbol | |
|---|
| ID | 4462070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 242387 |
|---|
| End bp | 243361 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639699253 |
|---|
| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
|---|
| Protein accession | YP_842684 |
|---|
| Protein GI | 116753566 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
|---|
| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTCC TTGGTATTGA GGGCACTGCC TGGAATCTCA GTGCAGCGAT CGTGAATGAG
GATGATGTGA TCATAGAGAG GGCTGCAACA TACACGCCTG CAAGGGGAGG TATTCACCCA
AGAGAGGCGG CGCAGCACCA CTCAGAGCAC ATCGGCCCGC TGCTGAGAGA GGTGATCCAG
GGCGCCAGAG ATCTCGGAAT AAAGATCGAC GGAGTCGCGT TCTCTCAGGG GCCCGGACTC
GGGCCGTGCC TGAGGACGGT CGCGACTGCG GCCAGGGTTC TCGCTTTGAA GCTCAATGTC
CCTCTCGTCG GCGTGAACCA CTGCATAGCT CATATCGAGA TTGGGAAATG GAAGACCGGA
GCCAGGGATC CTGCGGTGCT CTACGTGAGC GGCGGAAACT CCCAGGTTCT CGCCCTCAGG
CGCGGTCGCT ACAGGATCTT TGGCGAGACC CTGGACATCA GCGTCGGGAA CATGCTTGAC
AAGTTCGCAC GCTCAGTCGG TCTTCCGCAC CCTGGAGGGC CGCGGATAGA GGAGCTCGCC
AGGAATGCAA AGGAATACAT ACCGCTTCCC TACACCGTCA AGGGAATGGA CTTCTCCTTC
TCAGGGCTTG CGACCGCTGC AGCAGAGGCC GCCAGGAGAT ACGATCTGGA GGACGTCTGC
TACAGCCTCC AGGAGACCGC ATTCGCGATG CTCGTCGAGG TCACAGAGCG CGCGATGGCA
CATGCTGAGA AGAAGGAGGC AATGCTTGTC GGTGGAGTCG GGGCGAACCG GCGGCTCGGA
GAGATGCTTA GGCTGATGTG TGAGGAGCGC GGCGCGAGAT TTTATCTCCC TGAAAGGCGT
TTCATGGGCG ATAACGGATC GATGATAGCA TATACAGGGC TGGTGATGCT CAAGAGCGGC
GTGAGCACGC CGATTGAGAG CTCAGGCGTC AGGCCTAATT ACAGGACAGA TGAGGTCGAG
GTGAGATGGG CCTGA
|
|---|
| Protein sequence | MYVLGIEGTA WNLSAAIVNE DDVIIERAAT YTPARGGIHP REAAQHHSEH IGPLLREVIQ
GARDLGIKID GVAFSQGPGL GPCLRTVATA ARVLALKLNV PLVGVNHCIA HIEIGKWKTG
ARDPAVLYVS GGNSQVLALR RGRYRIFGET LDISVGNMLD KFARSVGLPH PGGPRIEELA
RNAKEYIPLP YTVKGMDFSF SGLATAAAEA ARRYDLEDVC YSLQETAFAM LVEVTERAMA
HAEKKEAMLV GGVGANRRLG EMLRLMCEER GARFYLPERR FMGDNGSMIA YTGLVMLKSG
VSTPIESSGV RPNYRTDEVE VRWA
|
|---|
| |