Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0154 |
Symbol | |
ID | 4462828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | + |
Start bp | 146083 |
End bp | 146631 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639699163 |
Product | XRE family transcriptional regulator |
Protein accession | YP_842594 |
Protein GI | 116753476 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGA AGCTTGAGGA GATCGGATCG CGGATACGTG AGCTTCGAGA GCTCTCAAAG ATTTCGCCTG AGGAGATGGC CGGATACCTC AAAGTGCCGC TTGAGACATA CTGCGGGTAC GAGTCAGGCC ATCTCGACAT ACCTGCGAGC CTGCTTTTCA AGATCGCGCA GCGCCTCGAT GTCGACATGA GTCTCCTTCT AACAGGCCAG GAGCCGAAGA TGAGCATCTT CACCGTGACC AGAAAGGGGG AGGGAGTGGA GGTCGAGAGG AGGAAGCAGT ACAGGTACCA GAGCCTCGCG GGGCGGTTCG CACATAAGAA GGCAGAGCCA TTCATAGTCA CCGTCGAGCC GCGGTCTGAA AAGCCAGCGG TCTACAGCCA TCCCGGCCAG GAGTTCGACT ACATCCTGGA GGGGACCATA AAGATATACA TCCACAACAA CGAGATCGTC CTCAACGAGG GCGATTCGAT ATTCTTCGAT TCGTCTTATG ATCACGCTAT GGAGGCTCTC AACAACAGAC CTGCCAGGAT GCTTGTCATT GTCATGTGA
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Protein sequence | MNEKLEEIGS RIRELRELSK ISPEEMAGYL KVPLETYCGY ESGHLDIPAS LLFKIAQRLD VDMSLLLTGQ EPKMSIFTVT RKGEGVEVER RKQYRYQSLA GRFAHKKAEP FIVTVEPRSE KPAVYSHPGQ EFDYILEGTI KIYIHNNEIV LNEGDSIFFD SSYDHAMEAL NNRPARMLVI VM
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