Gene Mthe_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0129 
Symbol 
ID4462303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp119713 
End bp120927 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content56% 
IMG OID639699137 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_842569 
Protein GI116753451 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGC ATTTCTCATT TGAGGTTCTG AAGCGGTCGA GGACGACGCT TGCGAGGCTT 
GGGGTGATCA GGACGCGCAG GGGGATTATA GAGACACCCC AGTTCATCCC AGTCGCCACC
GTGGCATCTG TCAGAGCCCT CGGATCCGAT GATCTCAGGG CTCTGGGTGT GCAGGCGATA
TTCGCAAACA CATATCACCT CCATCTGAGG ACAGGAGAGG ATCTCATCAG GAGGATGGGC
GGGCTTCACA GGTTCATGTC GTTTGATGGG CCAATCTTCA CAGACTCTGG CGGCTTCCAG
GCATTCTCCC TCGGGCTCGG GCGGGAGCAC AACATCAGCA AGATAGGAAG CATATTTCCT
CACGGAAGAC GATCTGCAGA GAGGAGAGAG AACCTGACAA GGATCACGGA TGAGGGCGTC
GCCTTCAAGT CGCTCGTCGA TGGCGGATGG CACTTTATCG ATCCCAGGAG CGCTATGAGG
ATCCAGAGCA GGCTTGGATC TGATATCGTC ATGGCATTCG ATGAATGCAC GTCTCCTCTC
TCAGATTACG ATTACACCAG GGAGGCGATG GAGAGGACTC ACCGCTGGGC TGTGCAGTCG
TTGAGATACC ACGACAGGAG ACAGGCGATA TACGGCATCA TCCAGGGAGG ATGGTTCGAG
GATCTGCGCA GGGAGAGCGC TGATTTCATA AAGTCGCTGC CGTTCGATGG GATCGCGATC
GGGGGCTCTC TCGGGAACTG CAAGGCAGAT ATGCATCAGG TTCTGGAGTG GGTGGTGCCG
AGGCTGGACG CGCGGCCGAG ACACCTCCTG GGAATCGGGG AGATCCCGGA CATCTTCGAG
TGCGTCGAGA GGGGCATCGA CACCTTCGAC TGCGTCCATC CGACGAGAAT CGCACGCAGG
GGCAACCTGT ACATATCTCC CGCATCTGGA GGGTGCCTGG AAAACAAGTT CAGGATAAGC
ATAAAGTCCT CGGTTTTCAA GGACGACAAG AGGCCCGTGG ACCCGAGATG CGGGTGCCCA
ACATGCAGGA TGTACAGCAG GGCGTATCTC AGACACCTCT ACATCTCGAA CGAGCTCTCA
TACTTCAGAG CCGCCACAGT ACATAATGTA TACTTCATGC TAAGGCTGAT GGAGTCGATA
AGAAAATCAA TAAGATCTGG GAAGTTCAGC GCGCTAAAGA GAAGGTGGAT GAAGGGTGAG
CAGGCTCCAG GATGA
 
Protein sequence
MAEHFSFEVL KRSRTTLARL GVIRTRRGII ETPQFIPVAT VASVRALGSD DLRALGVQAI 
FANTYHLHLR TGEDLIRRMG GLHRFMSFDG PIFTDSGGFQ AFSLGLGREH NISKIGSIFP
HGRRSAERRE NLTRITDEGV AFKSLVDGGW HFIDPRSAMR IQSRLGSDIV MAFDECTSPL
SDYDYTREAM ERTHRWAVQS LRYHDRRQAI YGIIQGGWFE DLRRESADFI KSLPFDGIAI
GGSLGNCKAD MHQVLEWVVP RLDARPRHLL GIGEIPDIFE CVERGIDTFD CVHPTRIARR
GNLYISPASG GCLENKFRIS IKSSVFKDDK RPVDPRCGCP TCRMYSRAYL RHLYISNELS
YFRAATVHNV YFMLRLMESI RKSIRSGKFS ALKRRWMKGE QAPG