| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0111 |
|---|
| Symbol | |
|---|
| ID | 4462286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | + |
|---|
| Start bp | 104658 |
|---|
| End bp | 105155 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639699120 |
|---|
| Product | acetolactate synthase, small subunit |
|---|
| Protein accession | YP_842553 |
|---|
| Protein GI | 116753435 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
|---|
| TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.849988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACA CCATCGCAGT CATCGTCGAG AACAAGCCCG GGGTCCTCAC CAGGATCTCC
GGGCTGTTCA GCAGGAGGGG CTTCAATATA GAGAGCCTCT CAGTTGGTGC CACTGACAAT
CCCGCCTACT CCAGGATGAC GATCTCCGTC GAGGGCGATG ATGTCGTTCT GGAGCAGGTT
GTGAAGCAGC TCAGCAAGCT GATCAATGTC ATAAGGGTGA GCAGGCTCGA TCCTCAGGAA
TCGGTGGAGC GCGAGCTTGC GATCATAAAG GTCAGCGCGA ACAAGGATAC GCGATCGGAG
ATAATGCAGA TAGTCTCCGT CTTCAGGGCC AGGATAATCG ATGTCTCCCC GAGATCTCTC
ATTATAGAGG TCACGGGTGA CGAGAAGAAG GTCGATGCGC TCCAGCAGAT GCTCCGCCAG
TTCGGAATCA AGGAGATGGC CAGGACAGGC AAGGTCTCCA TGGTCAGAGG AAGCAAGGTG
GTCCAGGCTG GACCTTAG
|
|---|
| Protein sequence | MKHTIAVIVE NKPGVLTRIS GLFSRRGFNI ESLSVGATDN PAYSRMTISV EGDDVVLEQV
VKQLSKLINV IRVSRLDPQE SVERELAIIK VSANKDTRSE IMQIVSVFRA RIIDVSPRSL
IIEVTGDEKK VDALQQMLRQ FGIKEMARTG KVSMVRGSKV VQAGP
|
|---|
| |