| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0087 |
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| Symbol | |
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| ID | 4463367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | - |
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| Start bp | 78173 |
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| End bp | 79273 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639699096 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_842529 |
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| Protein GI | 116753411 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTCCA TCGCAGCTCT TCTGCAGAAG GCTGAAGAGA AGTACCTCGA TGGGTCTTAC
GATGAAGCAA TAGAGTACTA CGACAGGGTG CTGGATATCG ATCCTATGAA TACTGCGGCA
TGGTGTGGAA GGGGGATGGC CTGCTTCTGC TTCTCCCGCT ATGAGGATGC TCTGGAGTGC
TATAGCAGAG CGATTGAGGC GGATCCGGAG TGCGTGCCGG CCTGGGAGTG TCGCGCAGAG
GTCCTCTTCA TTCTGGGGAG ATGCGATGAG GCGATCAGCT CCTATCAGGA GGCCATAGAC
AGGGATCCTG CATATGCTCT CGCCTGGATC GAGCGGTGTA TCGATTCCAG GCCGGATGAT
GCGGAGAGCT GGAGGCAGAA GGGCCTGGCG CTTCTCTCCA TGGGAAGGTA CGAGGAGGCG
ATCGAGGCCT ACCGCATGGC TCTGGATATC GACCCCTCAC AGGCCAGGGA CTGGTGCATC
CTCGGAGAAT CTCTACAGAC AATCGGAAGG CACAGCGAGG CACTCGAGTG CTTTGAGAGA
GCTCTTGAGC TCAGCCCATC AGATTCTGCG TGCTGGATCA GGATGGGCGA GTCGATGCAC
AGCACCGGGA GGTACGATGA GGCTCTGGAG TGCTACGAGG AGGCGCTAAG GCTTGACCCG
GGATCTGTCC AGGCATGGCA TGGAAAGGGC ATCACTTACA GAGCTATGGG AATCCCCTCA
AAGGCGATAG ATGCAATCGA CTCAGCTCTC ACACTCGATC CAGAGCACGC TCAATCATGG
TACGCGAAGG GCATCACATT CAGGGCCATG GGTCTATATG AGGACGCACT GGAGTGCTTC
GATCGTGTTC TCAGAATCGA TCCCGGCAAT GCATCTGCGC TCAAGAGCCG GGCCTGGTCG
CTCTACAACC TCGGCCGATA CGCGGAGGCG CTCAGCGCAT GTGAGGGGGC GATATCTGTC
AACCCCTTGG ATGAGGATGC ATGGTATAAC ATGGGGATCG TGCTCAAGGC GCTGGGAAGG
TACACGGAGA GCGACATGGC GTTCATAAAA GCCCGGGAGA TCAGAGTCGT GAAGCTCTCA
AAGAATCGCA TGCGTGGATG A
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| Protein sequence | MVSIAALLQK AEEKYLDGSY DEAIEYYDRV LDIDPMNTAA WCGRGMACFC FSRYEDALEC
YSRAIEADPE CVPAWECRAE VLFILGRCDE AISSYQEAID RDPAYALAWI ERCIDSRPDD
AESWRQKGLA LLSMGRYEEA IEAYRMALDI DPSQARDWCI LGESLQTIGR HSEALECFER
ALELSPSDSA CWIRMGESMH STGRYDEALE CYEEALRLDP GSVQAWHGKG ITYRAMGIPS
KAIDAIDSAL TLDPEHAQSW YAKGITFRAM GLYEDALECF DRVLRIDPGN ASALKSRAWS
LYNLGRYAEA LSACEGAISV NPLDEDAWYN MGIVLKALGR YTESDMAFIK AREIRVVKLS
KNRMRG
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