Gene Mthe_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0079 
Symbol 
ID4463359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp67781 
End bp68416 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID639699088 
Product30S ribosomal protein S3Ae 
Protein accessionYP_842521 
Protein GI116753403 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTAGAA GGGCACAGAG GAAAGCAGAA AGGGCAAAGG TCAAGCAGTG GTACAAGGTC 
CTCGCACCTG AGATGTTCGG GCGCACGCCT GTTGGCGAGA CGCTCGCAAA CGACCCGAAC
AAGCTCCTCG GGAGGGTGAT CGAGACCACG CTTGGTGACC TTACAAACAA CTTCTCGAAG
CAGAACACGA AGCTCAGGTT CAAGATAGAT GCAGTGGCTG GTGATACAGC CTACACGAAG
TTCATAGGCC ACGAGATGAC CACAGATTAC ATCAGATCCC TTGTCAAGCG CAGGACATCG
CGTATCGATG CGGTGGTGGA TGTGACCACA AGCGATGGGT ATCTGGTCAG GGTAAAGCCG
AGCTGCTTCA CCGTCAAGAG GGCCAGGGCG AACCAGGTCA AGGCTATAAG GGAGATCTCG
CGACAGGTTA TAATCTCCAG GGCGGGGAAC ATAGACCTCA ACGGGCTCAT TCAAGAGGTC
GTCCTAGGCA AGCTCTCTCT TGACATATAC AAGGACGCGA AGGCTGTGTA TCCTCTCAGG
AGAGTCGAGA TAAGAAAAAC GGAAATACTT GCAGGGCCCG GAGAGGTCCC GCATCCAGCC
GCTGTCCCGG AACCAACAGT CACTGCAGGG TCCTGA
 
Protein sequence
MARRAQRKAE RAKVKQWYKV LAPEMFGRTP VGETLANDPN KLLGRVIETT LGDLTNNFSK 
QNTKLRFKID AVAGDTAYTK FIGHEMTTDY IRSLVKRRTS RIDAVVDVTT SDGYLVRVKP
SCFTVKRARA NQVKAIREIS RQVIISRAGN IDLNGLIQEV VLGKLSLDIY KDAKAVYPLR
RVEIRKTEIL AGPGEVPHPA AVPEPTVTAG S