Gene Mthe_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMthe_0047 
Symbol 
ID4462739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosaeta thermophila PT 
KingdomArchaea 
Replicon accessionNC_008553 
Strand
Start bp43314 
End bp43802 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID639699056 
ProductAsnC family transcriptional regulator 
Protein accessionYP_842490 
Protein GI116753372 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0361845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAGG ATGCAAGCCG CATGAGCCAG GAGATGGATC AGACGGATCT CACGCTGCTC 
AGAGCACTGC AGGATGGAAT ACCGATAGTG CCCCATCCAT TCAAGGAGAT CGGAGATAGG
CTCGGGCTTG ATGAAAATAC TGTGATATCA AGGCTCAGAG CTCTCCGCGA ATCAGGGGTT
GTGAGAAGGT TCGCGGCCAC CATAGGGCAC AGGGCTCTGG GAATAATCGC GAACGCGATG
ATCGTCTGGA AGGTCGAAGA CGACATCGAA AGGATTGGAT GCATAATGGC CTCCTTCGAG
GAAGTCACCC ACTGCTACCA GAGGGCGACA TGTGATGGGT GGCCTTACAA TCTTTACACA
GTCGTACATT CGAGGAGCAG AGAGGAGTGT GAGGAGATCG CATCAAGGAT ATCAGAGGCC
ACAGGCGTGA AGGAGTACAG GATACTCTTC AGCGAGAAGG AGTACAAGAA GACGAGCGCG
AGGATATGA
 
Protein sequence
MQEDASRMSQ EMDQTDLTLL RALQDGIPIV PHPFKEIGDR LGLDENTVIS RLRALRESGV 
VRRFAATIGH RALGIIANAM IVWKVEDDIE RIGCIMASFE EVTHCYQRAT CDGWPYNLYT
VVHSRSREEC EEIASRISEA TGVKEYRILF SEKEYKKTSA RI