| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0046 |
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| Symbol | |
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| ID | 4462738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 41252 |
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| End bp | 43309 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639699055 |
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| Product | carbohydrate-binding and sugar hydrolysis |
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| Protein accession | YP_842489 |
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| Protein GI | 116753371 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0357051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCCTGT GGCGGGCTGT GCTGATAATG TCTCTGGTGG TCATGATAGT ATCCGCATCC
AGCGCGAGGA TTCTGGTTGT GGATCAGGAG GCGACGGGCG CGATCAGAAG CGTGAATGCA
GCGCTCGCAA ACGCGCAGAA CGGTGACGAG ATACTTGTAA TGGCGGGGTA TTATAGGGAG
AGCGTGGATG TCAATAAGTT GGTCTCCATA AAAGGATATG GTGCGATCAT CGACGGCATG
GGCCGTACGA CCTTCCAGAT GAGATCATAC GGGAGCAGCA TATCCAACCT CACGATCCTC
GGGAGCGGCA GGGATCCGGC AGTCGTGGTA GAGGGATATG CATCTGTGAC CGGCTGCAAC
ATCAAAAACT CCTCCATTGG AATCGCGGCA TACAAGGGAG TGGTATCGAA CAACACTATT
TCAGCTACCG CATATGGGAT CAGGCTGAAC GGCTCCGCGA TTGTAGAGAA CAACACGATA
TCAGGACCGC TGGGGGCCGG CATAGAGGTG AGGTGCAACA GCTCCAGGAT CCTCAGTAAC
ATTGTGACCT CTGCAGGAAA TGCGATAGAT GTGGTCGGAA ACAACAACAC CGTTCTTTTC
AACCACCTCT CCTCATCGAA CATAGGCATA CGGCTGAAGT CATCTTCTGA TAACATAATG
ATGAATAACA CCTGCGAGAA GAACAGGATC GCTGGAGTTT ATCTGGAGGA TTCCAGGAAC
AACAGCGTAT CCTCGAACAG GTTTCTCCGC AACGGCAACG GTATCCTCCT GAAATCCTCT
TCGGGTAATA AGATAATCGG AAATATCGTA GAGCTGAACG AGTACGGGAT ATCGATGAAG
GGCTCTGGTG GTAACCTGCT CAGAGAGAAC GTGCTGATAT CAAATATATA CAGCTTGAGG
ATAGAGGCAG GCAACCTAGG AGATCTCAGG CTCATATCAG ATCCCAGGGC CAGGATGGAC
GACAACTCAT TCAACCAGAG CATCGATGAG TCGAACACGA TAGATGGCAG GCCGGTTCTG
TATCTGGTAG GTGCTCGCAA CGTTTCGATA GATAAGAGCT ACGGATTTGT GGGGCTCATA
GACTGCGAGA ACATCACGAT GAGAAACCAG AGCATATCGA ACAGCAGCGC GGCCATCATG
CTTGTGGGAG CAATCGACTC CAGGATCTCG GACTGCAGGC TCTCCAGAAG CGAGATAGGG
TTATCGATCC TCGACTCGAA AGGCTGTGTG GTGGAGAACA CAACCGCAGA GTCCTGCGGG
ATCGGCTTCT GGTTCGGTCG GTCGCAGGAT ATCTTCGTGA GAAAGAGCGC GGCGCTGAAC
TGCACAGAGA GCGGATTCAG GCTCGAGGGT GACAGGAGAT CGAGGATAAC GGACTCCCGG
GCAGAGAACT GCACTGCCGG GATGCACCTC CTTGACGCCC TCTCCTCAGA GATCGTGCGT
TCCAGGATAT CCTCAAGCAG TGAGGATGGC ATACGGCTGG TCAGGTCGCA CAGATCAACG
GTGAAGGAGA ATGAAGTGAC AGGAAACGAC AACGGCATAG CGATCTCCGG CTCAAATCAG
TGCGTTCTTG CGATGAACAA CGCGAGCGCC AATGGGATAG GGATAAGGAT CGAGCAGCTC
TCCGGAGGAT CTGCTGCTGA TAACATCGCT TTCCGGAACA GGGAGGGGAT CTTCGTGAAC
GGGGTGAAGG AATTCCAGTT CATCGGCAAC AACATCAGCA TGAACGAAAG ATTCGGAATG
CGAATGGGAA GCAGCTCAGG CTGCAATATA AGCGATAATA GATTCGTAGG CAACGGCATG
CTCGGCCTGA GCCTGACAGA CTGCAGCGAC AACAGAATCT ACCACAACAG TTTCATCGAG
AATGGTTCAA TGTTTGGACA GAACGCCGTG GATAACGGAA GCAACCTCTG GGATATGGGG
CCGGTGATCG GAGGAAACTA CTGGTCGGAT CATCAGGTTA GTGGAAATCC CGGAGATACT
CCAAAGAATG TGCCATCAAA GGGCGTGGAC AGATATCCAT TCGAGAGGGA TAATGGATGG
AGGTCACCCG CTCTGTGA
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| Protein sequence | MGLWRAVLIM SLVVMIVSAS SARILVVDQE ATGAIRSVNA ALANAQNGDE ILVMAGYYRE
SVDVNKLVSI KGYGAIIDGM GRTTFQMRSY GSSISNLTIL GSGRDPAVVV EGYASVTGCN
IKNSSIGIAA YKGVVSNNTI SATAYGIRLN GSAIVENNTI SGPLGAGIEV RCNSSRILSN
IVTSAGNAID VVGNNNTVLF NHLSSSNIGI RLKSSSDNIM MNNTCEKNRI AGVYLEDSRN
NSVSSNRFLR NGNGILLKSS SGNKIIGNIV ELNEYGISMK GSGGNLLREN VLISNIYSLR
IEAGNLGDLR LISDPRARMD DNSFNQSIDE SNTIDGRPVL YLVGARNVSI DKSYGFVGLI
DCENITMRNQ SISNSSAAIM LVGAIDSRIS DCRLSRSEIG LSILDSKGCV VENTTAESCG
IGFWFGRSQD IFVRKSAALN CTESGFRLEG DRRSRITDSR AENCTAGMHL LDALSSEIVR
SRISSSSEDG IRLVRSHRST VKENEVTGND NGIAISGSNQ CVLAMNNASA NGIGIRIEQL
SGGSAADNIA FRNREGIFVN GVKEFQFIGN NISMNERFGM RMGSSSGCNI SDNRFVGNGM
LGLSLTDCSD NRIYHNSFIE NGSMFGQNAV DNGSNLWDMG PVIGGNYWSD HQVSGNPGDT
PKNVPSKGVD RYPFERDNGW RSPAL
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