Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mthe_0029 |
Symbol | |
ID | 4463407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosaeta thermophila PT |
Kingdom | Archaea |
Replicon accession | NC_008553 |
Strand | + |
Start bp | 27132 |
End bp | 29762 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639699037 |
Product | DNA-directed RNA polymerase subunit A' |
Protein accession | YP_842472 |
Protein GI | 116753354 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.358518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTC CAAAGAGGAT TGGAAAGATA AGGTTCGGCC TGATATCTCC GCAGGAGTTC AGGAAGATGA GCGTGGTCAA GGTGATCACG GCCGATACCT ACGATGATGA TGGCTTTCCC ATAGAGATGG GTCTGATGGA CCCCAGGCTC GGCGTCATAG ATCCTGGTCT CCGATGCAGA ACATGCGGCG GCAGGCCCGG GGAGTGCCCC GGACACTTCG GACACATCGA TCTCGTGGCT CCGGTGATAC ACGTTGGCTT CGCGAAACTC ATCAGGAAGA TCCTGAGAGC GATATGCAGG GAGTGTTCAA AGCTCATGCT CTCCGAGCTG GAGAAGAAGG AGTTTCTCAG GCAGATAAGA ACGCTTGAGG ATCTCGGGCA GCCCACAGAG GATGTTGTGA ACAAGGTCTT CGCAGAGGCA AGGAAGCACA AGACCTGCCC GTACTGCGGT GCCCCTCAGA GGGAGATCAA GTTCGAGCGG CCGCTCTCAT ATATAGAGGA CGGACACAAG CTCACGCCCT CTGACATAAG AGACAGGTTC GAGAGGATCT CCGACGAGGA CATAATGGTC ATGGGGATGA ACCCGGAGAC GGCAAGGCCT GAGTGGACGA TACTCACGGT GCTGCCAGTG CCTCCTGTCA CAATGAGACC ATCTATAACG CTGGAGAGCG GACAGAGGAG TGAGGACGAC CTGACACACA AGCTCGTGGA TATAATAAGA ATAAACCAGC GATTCCAGGA GAACCGAGAG GCAGGTGCGC CGCAGCTGAT AATCGAGGAC CTCTGGGAGC TTCTCCAGTA CCACGTCACG ACATTCCTGG ATAACACTGT TTCAGGGGTA CCTCCAGCCA GGCACAGAAG CGGCAGGCCC CTCAAGACAC TCTCGCAGAG GCTCAAGGGC AAGGAGGGGA GGTTCAGAGG CTCTCTCTCC GGAAAGAGGG TCAACTTCAG CGCGCGAACT GTAATATCTC CATATCCAAA CCTCTCAATA AACGAGGTCG GGGTTCCGAT CGAGGTTGCA AAGGAACTCA CAGTCCCGAT AATGGTCACC CCAAAAAATA TCGAGGTCGT CAGGAAGTAC GTGATGCGGG GGCCAGACAA CCATCCTGGT GTCAATTACG TAACACGTGC AGATGGGAGG AGAGTCAAGG TCACCGAGAG AAACTGCCAG GAGGTCGCGG AGCAGCTCGA GGTTGGCTGG AAGGTGGACA GGCAGCTTGC AGATGGTGAT ATCGTTCTCT TCAACCGGCA GCCCTCGCTC CACAGGATGT CGATAATGGC GCACAGGGTC AAGGTCATGC CGTACAAGAC ATTCAGGCTG AACCCAGCGG TATGCCCGCC GTACAACGCA GACTTCGATG GCGACGAGAT GAACCTCCAT GTGCCACAGA CAGAGGAGGC GAGGGCAGAG GCTGAGATCC TGATGCGGGT CCAGGAGAAC ATCCTCTCCC CCAGATTCGG CGGCCCGATC ATAGGCGGGA TACACGATTA TGTCACCGGA AGCTTCCTGC TCACCCACAA GGAGCGCAGG CTCAATAAGG ACAGACTCAT GGAGGTTCTC AAGAAGCTTG ATATAAGCGA CATCCCTGTG CCTGCAGGAT ATGACGAGAA CGGCGATCCG TACTGGACAG GAAAGCAGAT ATTCAGCCTG ATACTGCCAA AGGATCTTAA CCTCACGTTC AAGGCAGACT TCTGCAGCAA CTGCCCTGTC TGCAAGGGCG AGGATTGCGA GAATGATGCG TATGTGGTTA TACGCAACGG CGTCCTTCTC AAGGGCACGA TCGATGCAGA GGCTGTGGGC GCCTTCAAGG GGAAGGTGAT AGATCGCATA ATAAAGGAGT ATGATCCAGG GGTTGCGAGC CAGTTCCTGG ACAGGATGAC GCTCCTGGCG CTCCGCGGGA TCATGCTCGC CGGCTTCAGC TTCGGCATCA GTGACGAGGA TGTGCCAAGA GAGGCTGCAG AGCAGATCCA GGATGTCACA AGATCCGCGA AGGAGAGTGT CCAGAGGCTT ATAGAGGCTT ACAGGGCGGG AGAGCTGGAA CCGCTTCCCG GACGCACTCT TGAGGAGACG CTGGAGATGC GCATAATGCA GACGCTGGGC AAGGCGAGGG ATGCTGCTGG ACAGATCGCA GGCCGTTACC TCGGACTGGA CAACAGCGGC GTGGTCATGG CGGTCTCCGG CGCCCGCGGC TCGATGCTGA ACCTAACGCA GATGGCAGCA TGTGTGGGCC AGCAGTCGGT CAGGGGCGAG AGGATAAAGC GCGGCTACAC TGATAGAACC TTACCACACT TCAAGCGCGG AGATCTCGGC GCCGAGGCTC ATGGCTTCGT CGAGTCGAGC TACAAGAAGG GTTTATCGCC GACTGAGTTC TTCTTCCATG CGATAGGTGG CAGGGAGGGT CTTGTGGACA CCGCGATAAG AACATCCCAG AGCGGCTACC TCCAGAGGCG CCTGGTAAAC GCCCTACAGG ACCTGGAGGT GAACTACGAC GGCACCGTCA GGGAGACCCG CGGCATGATC GTCCAGTTCA AGTACGGAGA GGACGGGGTC GATCCATCTA GGAGAGACTA CGCAAGCCCG GAGAACGTGC ATCGAATAAT AAGAAAGGTC CTCGCGGGTG AGAACGCATG A
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Protein sequence | MSVPKRIGKI RFGLISPQEF RKMSVVKVIT ADTYDDDGFP IEMGLMDPRL GVIDPGLRCR TCGGRPGECP GHFGHIDLVA PVIHVGFAKL IRKILRAICR ECSKLMLSEL EKKEFLRQIR TLEDLGQPTE DVVNKVFAEA RKHKTCPYCG APQREIKFER PLSYIEDGHK LTPSDIRDRF ERISDEDIMV MGMNPETARP EWTILTVLPV PPVTMRPSIT LESGQRSEDD LTHKLVDIIR INQRFQENRE AGAPQLIIED LWELLQYHVT TFLDNTVSGV PPARHRSGRP LKTLSQRLKG KEGRFRGSLS GKRVNFSART VISPYPNLSI NEVGVPIEVA KELTVPIMVT PKNIEVVRKY VMRGPDNHPG VNYVTRADGR RVKVTERNCQ EVAEQLEVGW KVDRQLADGD IVLFNRQPSL HRMSIMAHRV KVMPYKTFRL NPAVCPPYNA DFDGDEMNLH VPQTEEARAE AEILMRVQEN ILSPRFGGPI IGGIHDYVTG SFLLTHKERR LNKDRLMEVL KKLDISDIPV PAGYDENGDP YWTGKQIFSL ILPKDLNLTF KADFCSNCPV CKGEDCENDA YVVIRNGVLL KGTIDAEAVG AFKGKVIDRI IKEYDPGVAS QFLDRMTLLA LRGIMLAGFS FGISDEDVPR EAAEQIQDVT RSAKESVQRL IEAYRAGELE PLPGRTLEET LEMRIMQTLG KARDAAGQIA GRYLGLDNSG VVMAVSGARG SMLNLTQMAA CVGQQSVRGE RIKRGYTDRT LPHFKRGDLG AEAHGFVESS YKKGLSPTEF FFHAIGGREG LVDTAIRTSQ SGYLQRRLVN ALQDLEVNYD GTVRETRGMI VQFKYGEDGV DPSRRDYASP ENVHRIIRKV LAGENA
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