| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6914 |
|---|
| Symbol | |
|---|
| ID | 4454865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008545 |
|---|
| Strand | + |
|---|
| Start bp | 130099 |
|---|
| End bp | 130971 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639698975 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
|---|
| Protein accession | YP_840535 |
|---|
| Protein GI | 116687289 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTTG CAGTCTATAA AAAGGATGGG CACCGCGGCA TCGCGGTGGA GCACGGCGGG
CGATGGTTCG GGCTGACCGC CGAGGACACC GCCTATCCGG GCGATCTGGA TGCGCTGCTG
GCGCACGGCG CTGATCTTGC CGAAGTGGGC GCGCTTCTCG CGCGCGGCGC GCCGGTCGAT
CTCGAGGCGG TGCGCTTGCT GCCGCCGTTC GGACGGTCAG GCAAGATCGT CTGTGTCGGA
TTGAACTACC TCGACCACTC GACCGAGACC GGGTTTGCGA AGCAGGCCTA TCCGACCGTA
TTCGCGCGGT TTGCGTCGAG CCTGATCGGC CATGGCGACC CGATCGCGCT GCCGGCGCAA
TCGTCCCAAC TCGACTACGA GGGCGAACTA GTGGCGGTGA TCGGCAAGGG CGGACGCAGC
ATAGCGCGCG AGCGGGCGCT CGATCACGTC GCCGGCTATT CGATTTTCAA CGACGCCACG
CTGCGTGATT ACCAGTTCCG CACGCCGCAA TGGACGATGG GTAAGAACTT CGACGGGACG
GGGGCATTCG GGCCGTGGTT CGTCACGGCC GACGAACTGC CGCGCGGCTG CAAGGGGCTG
AAGATCCAGA CGCGCCTGAA CGGGGCGGTC GTGCAGGAGG CGTCGACGTC GGACATGATC
TTCGATGTCG AGACGCTGGT CGTGCTGCTG AGTGACGTGA TGACGCTGCA GGCCGGCGAT
GTGATCGTCA CGGGCACGCC TGCCGGTATC GGGATGGCGC GCGAACCGCA GCTCTGGATG
AAAGCCGGAG ACGTCTGCGA AGTCGAGATC GAGCGGCTCG GCGTGTTGCG CAACCCGGTC
ATGCCGGCGG CGATGGTCCG GCGCGACGCC TGA
|
|---|
| Protein sequence | MRFAVYKKDG HRGIAVEHGG RWFGLTAEDT AYPGDLDALL AHGADLAEVG ALLARGAPVD
LEAVRLLPPF GRSGKIVCVG LNYLDHSTET GFAKQAYPTV FARFASSLIG HGDPIALPAQ
SSQLDYEGEL VAVIGKGGRS IARERALDHV AGYSIFNDAT LRDYQFRTPQ WTMGKNFDGT
GAFGPWFVTA DELPRGCKGL KIQTRLNGAV VQEASTSDMI FDVETLVVLL SDVMTLQAGD
VIVTGTPAGI GMAREPQLWM KAGDVCEVEI ERLGVLRNPV MPAAMVRRDA
|
|---|
| |