| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6841 |
|---|
| Symbol | |
|---|
| ID | 4454898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008545 |
|---|
| Strand | + |
|---|
| Start bp | 56672 |
|---|
| End bp | 57445 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639698903 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_840463 |
|---|
| Protein GI | 116687217 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTC TGGAATTGCA TCGGCAAGGG CTGAGTATTT CGGCCATCGC TGCTCGACCG
AGTATGGACC GCAAGACCGT TCGTAAATAC ATCAGGAATG GCGTTCAGGC GCCGCGTTAC
GGTCCGCGCG CACCGCGACC GTGCGTGGTC GATCCGTTCG TCCACTACGT CACCGAACGT
GTCCGCGAGT TTCCCGACCT GAGCGTCGAG CGTCTGCTGC GCGAGATTCG AGCCATGGGT
TACGCGGGCG GCCGCACGGC GCTGGGCGAT CTCGTTCGGG AGGTCCGCCC CCCACGCCAG
CGCGGCTTCG AGGTGCGCTT TGAGACGCCT GCGGGGCATC AAGCGCAGGT GGATTTCGCC
CACTTCAATG TCGAGTTCGA CGACGCGCCT GGCCAGCGAC GTTCGATCTG GCTGTTCTCG
ATCGTGCTTG GACACAGCCG TTATCTCTGG GGACGCTTCG TCGAGCATCA GGACCTGCAG
ACCGTCCTGC GCTGCCACAT GGAAGCGTTC GAGCACCTCG GCGGCGCTCC GCGCGAGATT
CTGTACGACC GGATGAAGGC GGCTGTGCTG GGCGAAGTCG AGAAGCACAT CGTCTACAAC
GCGAAGCTGG TCGCGTTTGC GCAGCACTAC GGCTTCGCGC CGCGCGCCTG CAAGGCGTAT
CGCGCCAAGA CCAACGGCAA GGTCGAGCGG CCGTACCGCT ATATCCGGCA GGACTTCTTC
CTGGCGCGTC GCTTCCAGAA TCTCGCCGAC CTGAACCGAC AGTTGCGCGA GTAG
|
|---|
| Protein sequence | MTILELHRQG LSISAIAARP SMDRKTVRKY IRNGVQAPRY GPRAPRPCVV DPFVHYVTER
VREFPDLSVE RLLREIRAMG YAGGRTALGD LVREVRPPRQ RGFEVRFETP AGHQAQVDFA
HFNVEFDDAP GQRRSIWLFS IVLGHSRYLW GRFVEHQDLQ TVLRCHMEAF EHLGGAPREI
LYDRMKAAVL GEVEKHIVYN AKLVAFAQHY GFAPRACKAY RAKTNGKVER PYRYIRQDFF
LARRFQNLAD LNRQLRE
|
|---|
| |