Gene Bcen2424_6838 details

Gene Information

• Locus tag: Bcen2424_6838
• ID: 4454895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008545
• Strand: +
• Start bp: 53864
• End bp: 54343
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639698900
• Product: transposase IS3/IS911 family protein
• Protein accession: YP_840460
• Protein GI: 116687214
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2963] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAAC AACATTCAGA AACGTCGGGC CTGAAGGTCG TCAGCGTTGG CATAGACGGT 
AAGCGTCGAT TCGATCGGCA TACCAAACGC CGACTCGTCG AGGCTTGCCT GGAGCCGGGA 
GCATCAGTCG CAGGACTCGC ACTGCAGCAC GGCGTTAATG CGAATCTCCT GCGCAAATGG 
ATCAAGCTGC ATCAGCAACG GCTCTCTGAG GATTCGACGC AGTCGTCGAC CGCAGAGTCG 
GCATTCGTGC CGGTCGTTAT GGTTAGCAGT GAACAGGCGC TCGTCGAGCA CAATTCCGTC 
AGGTCTTCAT CGTTGGCCGC GACCGCTAGT TCGCCAGCAA ATGCAGCGGC CGCGTCGACG 
CTGACGGCGC AGATGCCCAA CGGCATCACG CTTAAGCTCG AATGCGGCAA GAACGACGCA 
GCGCTTCTAT CAGTGATGAT CGAAACACTG GGACGGTGTG ATGTTCCGGC TAAGCGATGA 

 

Protein sequence

MTEQHSETSG LKVVSVGIDG KRRFDRHTKR RLVEACLEPG ASVAGLALQH GVNANLLRKW 
IKLHQQRLSE DSTQSSTAES AFVPVVMVSS EQALVEHNSV RSSSLAATAS SPANAAAAST 
LTAQMPNGIT LKLECGKNDA ALLSVMIETL GRCDVPAKR