Gene Bcen2424_6817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6817 
Symbol 
ID4454874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008545 
Strand+ 
Start bp28279 
End bp28905 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content63% 
IMG OID639698879 
Productputative endonuclease 
Protein accessionYP_840439 
Protein GI116687193 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTC TCCTCTTCCT CGCGATCACG GCCGGTGTCG GCTACTACGT GCTGCATGAC 
GGCCCGACGC CGGATCTCGG CAATTTGTCG TCGTCCGTTG GGCATTTTGC GAGCTCTCTG 
AAGCACCCAG CCGACAACTC CTCACATTCA GAAAGCGCAG GCCCTGGCGA CCGCGCCTCC 
GTCCAATTCG CGACTTCACC CGACGGCCAG GCCGAGGCGC TCGTGCTGAG CGTGATCGAC 
AGCGCGCAGT CGGAGCTCGA CGTCGCCGCT TACGAGCTCA CCAATCGCCG CATCGTTACC 
CACCTGATCG AGCGCGCCCA CGCTGGTGTG CAGGTCCGTG TCGTCCTCGA CCGCTCCCAG 
CTTGACGGCC GCGGCTCGAA GCTCGCGGAT CTCGTCGCGG CCGGAATACC GGTTCGCATC 
GACATGGCCG TACCGCTCAT GCACGACAAG TTCATCGTGG CCGATAGCGA GACGACCCAG 
ACAGGCTCGA TGAACTATAC GCAGGCCGGT GCCAATCACA ACGCTGAAAA CGTCCTCGTC 
ATCTGGCATC ACGCCACGGT CGCCGCAGCC GTGCGCGCCG CGTGGGCGCG CCTATGGAAT 
GAATCGAAGC CTTACCCAGG TGTTTGA
 
Protein sequence
MKFLLFLAIT AGVGYYVLHD GPTPDLGNLS SSVGHFASSL KHPADNSSHS ESAGPGDRAS 
VQFATSPDGQ AEALVLSVID SAQSELDVAA YELTNRRIVT HLIERAHAGV QVRVVLDRSQ 
LDGRGSKLAD LVAAGIPVRI DMAVPLMHDK FIVADSETTQ TGSMNYTQAG ANHNAENVLV 
IWHHATVAAA VRAAWARLWN ESKPYPGV