Gene Bcen2424_6803 details

Gene Information

• Locus tag: Bcen2424_6803
• ID: 4454796
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008545
• Strand: +
• Start bp: 12932
• End bp: 13441
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639698865
• Product: Type IV secretory pathway protease TraF-like protein
• Protein accession: YP_840425
• Protein GI: 116687179
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4959] Type IV secretory pathway, protease TraF

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGCGC TCGTCGCCTA CACCAGCGGC CTGGCTCGCT ATCGGCGGTT TGTTCGCACC 
GTGGTCGCCC TGGCGATCGT GGCGGCTGTC GCATGGGGGC TCACGCCCTG GTATGGGCTG 
ACGTTCAACA TGTCGACGAG TCTGCCGGGG ACGCTCTACT TCATTCGCAA GGGCCCCTGT 
CGGCCGCGCC TCGGCGACAC CATCGCATTT CGGTGGCACG GTGGGGCGAC CTACCCCGCG 
GGACTGACCT TCATCAAACA CGTGGCTGGT TTGCCTGGCG ATGTCGTGCA CGTCGTTGGT 
CGCGACGTCT GGGTCAATCA GACCTATATC GGCTACGCCA AGCCGCTCTC GCTTGCAGGG 
ATGGCGCTGT TTCCGACCCA AGACGGCGTG ATTCCGCCCG GACACTACTT CGTGGCCACG 
CCGAATCCGA ACAGCCTCGA TTCGCGGTAC TCGATAGCCG GCACCGTTCC TCAAACCGCA 
ATCGTCGGGG AGGCCTATGA AATTTTTTAA 

 

Protein sequence

MIALVAYTSG LARYRRFVRT VVALAIVAAV AWGLTPWYGL TFNMSTSLPG TLYFIRKGPC 
RPRLGDTIAF RWHGGATYPA GLTFIKHVAG LPGDVVHVVG RDVWVNQTYI GYAKPLSLAG 
MALFPTQDGV IPPGHYFVAT PNPNSLDSRY SIAGTVPQTA IVGEAYEIF