| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6801 |
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| Symbol | |
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| ID | 4454794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008545 |
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| Strand | + |
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| Start bp | 9752 |
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| End bp | 12346 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639698863 |
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| Product | hypothetical protein |
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| Protein accession | YP_840423 |
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| Protein GI | 116687177 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC TGCAGGCCTG GATCGACGAC GCGAAATCGC TCGCGCGAAC AGCGATCAGC
GAAGCAATCC TCGGCACCGA GGACGACCTC GGGCCACCCG CCCCCGTCGC TGCCGACCAG
CGGCGCGTCG AGACAGTCGG ACTTCATAAC CTGCTGCCGT ATGACCAGTA CGACCCCGCC
ACGGAGCTCT ACTACAACAC GGATTCCGTT GGCTTCGTGC TTGCAGTTGC ACCGCAGACG
GGCGCTGACG CGGAGTTGAC CCGCAGTCTC CACGGCCTAT ATGACTCGGT TCCTGCCGGC
TATGGGCTTC AATGGATGCT GCTGGGCGAC CCCATCATCG AGGAGTCGTT AAACGCCTAC
GTCGACTTGC GGCGCGAGTA CGCCGAGGCG GGCCGTGCAC CCTCGTTCTA TCTGGAGCAG
GCCGAGCGCC GCGCCGCGTT CATCCGCGGC AAACTCGGCC AGCCGCTGTT TCTGGGCCAA
AACTACTCGA TCACGGACAA GCGGCTGTTG CTGTCGATCG TGCGCAAGGG CTCGCTCGAC
GATCTGAAGC TGATCGAAGA AATCCAGAAT ATTCGCGACG TCGTCGGCGC GACGCTGAGT
TCCGCAAGCC TGGCAAGCCG TACTGCGGAG CCCGACGATC TGAAGCGCTT TCTCTGGCCG
ATCCTCAACC CCAGTGCGTT CTTTGGCGAT GGAGCTGAGA CGATCGATCA GACCTACAGC
GACGACAAGC CCATTCGTGA CCAACTGACG GCTTTCGGTC ACCACATGCG TGTGAAGGCG
AAGCATTTGC TCTATGGAGT GCCGCCCGAG GATGCGGACG AGCCCGACGC ACGCATCGCG
GTGCGCAGCT TTGGCGTGCA CCAGTATCCG AAGAGCAAAG AGCTCTGGGA GATGAACAAC
ATCGTAGGTT CACTCTTCAA CGATGTCCAT CAATACCCCT GCCCGTACCT GATCACGCTC
GGCGTCCTGA TTCTCGATCA GACCGCCGTC GAGACACGGG CCGCTCTGCG TGGTGCTCGC
GCGACACAGA ACGCCGAGTC GAAAATCGCG AAGCTGCAGC CGGAACTCGC CCTGCAGAAC
CAGGACTGGA AAGCCGTCTC GATGCAGCTC ACGCAAGGTG GCTCGATGTG TGAGCTCTAT
CACACGCTGA CGCTCTTCGC TCCGCGCAAA AAGATGGAGC AGTGTGTGGC GGCCGCGAAA
GGAATCTGGC GCTCGGAGCG CTTCAAGCTG TTCCCGATGC TGACCCAGCA GCTTACGACG
TTCCTGTCGG CCCTGCCCAT GATGCTGACA AGCGACATGC GGGACGACCT CAAGAAGTTC
CGGTTGATCA CTACCAAGAC CACCGTGAAT GCGACCGACA TGGCGCCGGT GCTGGGCGAA
TGGTCGGGTA CCAGTGGACG AGCCAATCTG CTGTTCTTTG GGCGCCGCGG TACGCCCGCG
CTCGTAGACA TCTACTCGAG CGGAACGAAC TACAACGGCT TTGTGGATGG TACTTCCGGC
GCCGGTAAAT CGGTACTTCT GAACGAGATT ATCGGAGCGT TTCGCTCGGT CGGCGGAATC
GTCCGGATCT GCGATGTGGG CTACTCGTAT GAAAAGCAGA TCGACATGGG CGACGGCCAG
TACATCGACT TCAAGCCCGG GTCGCGAATC ATCATCAATG CGTTTTCGAC GGCCGGTATC
GATACCGAAA ATGGCCTCGA CAGCGAGGTG AAATTCATCC GGCCGATTAT CGCGCGCATG
GTATCGCCGA CCGCACCCAT CACCCCGTTC GAGGGTGCGT TGCTCGATGT CGCAGTGCGC
ATCGTATGGA AGGACTACGG TCAGGAAGGT AGTCCCACGT TGGTGCGGGA CGCCTTGTTG
AGCCTGAAGG ACCAGAACGG GCAACCCGAA CGCATCGCGT ATGAGCTTGC CGTGCGTCTC
GAACCGTTCT GCAAGGGCGG TGTTTACGGC GACTACGTCA ACGGGCGCAC CAACGTAAGC
CTCGATAACG AAGTGGTGGG CCTTGAACTC GAGCACCTCA ACAGCGATCC CCAACTGCGC
ACGGTGATCA TGCTCGGCCT GACCAATCAG GTCACCAACG AAATGTACCG CTTTGACCGG
TCGCGGCCGA AGCTATTCCT GCAGGACGAG GGCTGGCAGA TCGTCGGTGA CGATCAAGAG
TCGGCCGACT TCATGGAAGA AGGCTATCGG CGTGCGCGCA AATATGAAGG CAGCTTCTTT
TTCGCGACGC AGGGGATCAC CGATGCGGGG ATGAACAAGG CTACGCAGGC CGCCTTCGAC
AACTCCGCAT GGAAGTTCCA CCTCAAGCAA AGCGACGACA CGCTCAAGAA GATCGAGAAG
GGCGATGTGA TGGATCTGTC ACCGGGGCTG AAGCGCATGT TGAAGTCGCT GCGCCCGGTA
CCCGGTCGCT ATAGCGAGTT CGTCCTTGTC GATCCGAACG GAGGCACTCA CCTGCTGCGC
CATATCCCCG ACGAATTCAC TCTGGCCATG GCAACCACCA AGGGGCCGGA CTACGAATTC
ATGGAGCGGT TGCGTACCAG CGGCACTTCG ACCGAAGACG CCATCCGCGC CCTGATCCAA
GCCAAACGGA AATGA
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| Protein sequence | MSTLQAWIDD AKSLARTAIS EAILGTEDDL GPPAPVAADQ RRVETVGLHN LLPYDQYDPA
TELYYNTDSV GFVLAVAPQT GADAELTRSL HGLYDSVPAG YGLQWMLLGD PIIEESLNAY
VDLRREYAEA GRAPSFYLEQ AERRAAFIRG KLGQPLFLGQ NYSITDKRLL LSIVRKGSLD
DLKLIEEIQN IRDVVGATLS SASLASRTAE PDDLKRFLWP ILNPSAFFGD GAETIDQTYS
DDKPIRDQLT AFGHHMRVKA KHLLYGVPPE DADEPDARIA VRSFGVHQYP KSKELWEMNN
IVGSLFNDVH QYPCPYLITL GVLILDQTAV ETRAALRGAR ATQNAESKIA KLQPELALQN
QDWKAVSMQL TQGGSMCELY HTLTLFAPRK KMEQCVAAAK GIWRSERFKL FPMLTQQLTT
FLSALPMMLT SDMRDDLKKF RLITTKTTVN ATDMAPVLGE WSGTSGRANL LFFGRRGTPA
LVDIYSSGTN YNGFVDGTSG AGKSVLLNEI IGAFRSVGGI VRICDVGYSY EKQIDMGDGQ
YIDFKPGSRI IINAFSTAGI DTENGLDSEV KFIRPIIARM VSPTAPITPF EGALLDVAVR
IVWKDYGQEG SPTLVRDALL SLKDQNGQPE RIAYELAVRL EPFCKGGVYG DYVNGRTNVS
LDNEVVGLEL EHLNSDPQLR TVIMLGLTNQ VTNEMYRFDR SRPKLFLQDE GWQIVGDDQE
SADFMEEGYR RARKYEGSFF FATQGITDAG MNKATQAAFD NSAWKFHLKQ SDDTLKKIEK
GDVMDLSPGL KRMLKSLRPV PGRYSEFVLV DPNGGTHLLR HIPDEFTLAM ATTKGPDYEF
MERLRTSGTS TEDAIRALIQ AKRK
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