| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6789 |
|---|
| Symbol | |
|---|
| ID | 4454782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008545 |
|---|
| Strand | + |
|---|
| Start bp | 1389 |
|---|
| End bp | 1886 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698851 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_840411 |
|---|
| Protein GI | 116687165 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCT TCTGCGTGGC AGTTGCTGCC GCGATCGCCC TGCTCGCTGC TCCGCCAGCG
ACCGCGGACG TTTGCAAGGG CAATATCTTC AATGAGGCTG CCGCCCTCTA TCACCTCGAT
CCCGATCTCC TGCGGGCGAT AACCTGGGTC GAATCCCGTG GCGTGCCCGG CGCCATTGGG
CCGCGCTTGC CGGACGGCCA CAGGGCATGG GGGGCAGCGC AAATCAACGA TATCCATCTT
CCCGAGCTCG TCAGCTACGG CGTCACCCAA CGCGACCTCC TGAACCCCTG CGTGAACCTC
AAGCTCAGCG CGTGGGTGCT CGCCAACTGC ATCCAGGCCA AGGGCGCGAC CTGGGCCGCC
GTCGGTTGCT ACAACACAGG GCCCGGTTCC ACGAACATCG CCGCCCAGGC GCGCTATGTC
CGGCTGGTGC AGCGTGCATA TGCGGGCTAT CGCGCCCAGT CGGCGCTCGG CAAGGTCGCC
GAAGGAGGCG CGCGATGA
|
|---|
| Protein sequence | MRTFCVAVAA AIALLAAPPA TADVCKGNIF NEAAALYHLD PDLLRAITWV ESRGVPGAIG
PRLPDGHRAW GAAQINDIHL PELVSYGVTQ RDLLNPCVNL KLSAWVLANC IQAKGATWAA
VGCYNTGPGS TNIAAQARYV RLVQRAYAGY RAQSALGKVA EGGAR
|
|---|
| |