Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6776 |
Symbol | |
ID | 4454669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 1043020 |
End bp | 1043994 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698838 |
Product | type II secretion system protein |
Protein accession | YP_840398 |
Protein GI | 116687151 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.710361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.399772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACC TGAGCGTGGT CCAGGCCGTG ATGCTGGGCG GCTTGTTCAT CTTCGTGGCC GGCGGCGTGC TCGTCGCGAT GCTGCTGTTC GCGCCGCGCG GCATCCAGCG CCGGCTCCAG CAGGCCGGCG GGACCGGGGC GGGCGGCGTC GCCGGCGCGG GCGACGGCGA CGACATGGCG TCGCGCTGGG TCGCGAAGCT GGTCGAGCTG TCCAGCCCGA TCTCGAAGCT GTCGGTGCCG AAGGAGGGCT GGGAGAATTC GCCGTTGCGC ATCCGGCTGA TGAATGCCGG CTGGCGCAAC CAGAGCGCGG CCGCGGTGTA CTTCACCGCG AAGACGATGC TCGCGCTCGG CCTGCCGTGC GCCGCGCTGC TGGCGCTGAT CACCACGTCG CTCGGCGACG AGCGTGCGCT GCTGTCGCTG ATCCTCGTCG CGCTCGCCGG CATCGGCTAT TACATTCCGA ACATCGTGCT GTCGCAGCGG GTCAAGGTGC GCCAGCGGAA GATCTTCGAG GATTTTCCGG ACGCGCTCGA CTTGCTGACG GTGTGCGTCG AAGCCGGCCT CGGGCTCGAC GCGGCGCTGA TGAAGGTGAG CGAGGAGCTG CGGTTTCGCA GCGAGGTGGT CGCGAGCGAA CTCGACCTGC TGCTGCTCGA GATGCGCTCC GGCTTCACGA AGGAGACGGC GCTGCGCAAT CTCGCGCTGC GCACCGGCGT GGAGGACATC GAATCGTTCT GCGCGATGCT GATCCAGGCC GACCGGTTCG GCACGAGCAT CAGCGAATCG CTGCGCGTGC TGTCGGACAT GCTGCGCACG CGGCGCCGGA TGCGCGCGGA GGAACGCGCG GCGAAGATCG CGCTGAAGCT GCTGTTTCCG CTGATCTTCT GCATCTTTCC CGCGCTGATG ATGGTGCTGC TCGGCCCGGC GATGATTCAC GTGTATCGCG TGCTGCTGCC GACGTTCGTT GGCGTCGCGC CGTGA
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Protein sequence | MQNLSVVQAV MLGGLFIFVA GGVLVAMLLF APRGIQRRLQ QAGGTGAGGV AGAGDGDDMA SRWVAKLVEL SSPISKLSVP KEGWENSPLR IRLMNAGWRN QSAAAVYFTA KTMLALGLPC AALLALITTS LGDERALLSL ILVALAGIGY YIPNIVLSQR VKVRQRKIFE DFPDALDLLT VCVEAGLGLD AALMKVSEEL RFRSEVVASE LDLLLLEMRS GFTKETALRN LALRTGVEDI ESFCAMLIQA DRFGTSISES LRVLSDMLRT RRRMRAEERA AKIALKLLFP LIFCIFPALM MVLLGPAMIH VYRVLLPTFV GVAP
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