Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6753 |
Symbol | |
ID | 4454319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 1000281 |
End bp | 1001273 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698815 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_840375 |
Protein GI | 116687128 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0691662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGT TCTGGTCCCG CGTGTGGCAA TCCGCGGCCC TCGTCGTTGC CGCGCTTGCC GGCCTCATGT CCATGCAAGC GCAGGCGGCG ACGCCTGCGG AAATCCGCGT CGACTACGCG TACTACTCGC CCGAGAGTCT CGTGATCCGC CACTTCGGCT GGCTCGACGA TGCGTTCAAG GCCGACGGTA CGTCGATTCG CTGGGTGCTG AGCCTCGGCA GCAACCGCGC GCTCGAATAC CTGAACAGCG GCGCGGTCGA TTTCGGCTCG GCCGCGGGGC TCGCGTCGGT GCTCGCCCGC GCGAACGGCA ACCCGATCCA CACGGTCTAC GTGTTCTCGC GCCCCGAATG GACGGCGCTC GTGGTACGCA AGGATTCGCC GATCCGTTCG CTCGCCGATC TGAAGGGCAA GAAGATCGCC GCGACGCGCG GCACCGATCC GTTCCTGTTC ACGCTGCGCG CGCTGCACAC CGTTGGCCTG ACGCGCGACG ACGTCGAGAT CGTCAACCTG CAGCATCCGG ACGGCCGCAC CGCGCTCGCG AACGGTCAGG TCGATGCGTG GGCCGGGCTC GATCCGCACA TGGCCGCCGC CCAGCTCGAC GATGGCGCGC GCCTGCTGTA TCGCAACGTC GCGTTCAATA CGTACGGGTT CCTGAATGTT CGCGACGCGT TCGCCAGCCA GTATCCGCAG GCGGTCGAGC GCGTGCTGAA GGTCTACGAC CGCGCACGCC AGTGGATCGG CGCGCATCCG GCCGAAACCG CGCAGATCAT TGCCGACGAA TCGAAGGTGT CGCTGCCGGT CGCGAAGCTG CAGCTTCAGC GCAACGACTT CAGCGATCCG GTGCCGGGCG ACACGCAGCG CGCGGCGCTG AAGGCCGCGG CGCCGGTGCT GACGGCCGAG CAGTTGACCA AACCGGGCGT CGATCCCGCG AAGATCGTCG ATACGCTGAT CGATCCGTCG TTCGCGCGCC CGATCGTCGC CGCGTCGCAC TGA
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Protein sequence | MKPFWSRVWQ SAALVVAALA GLMSMQAQAA TPAEIRVDYA YYSPESLVIR HFGWLDDAFK ADGTSIRWVL SLGSNRALEY LNSGAVDFGS AAGLASVLAR ANGNPIHTVY VFSRPEWTAL VVRKDSPIRS LADLKGKKIA ATRGTDPFLF TLRALHTVGL TRDDVEIVNL QHPDGRTALA NGQVDAWAGL DPHMAAAQLD DGARLLYRNV AFNTYGFLNV RDAFASQYPQ AVERVLKVYD RARQWIGAHP AETAQIIADE SKVSLPVAKL QLQRNDFSDP VPGDTQRAAL KAAAPVLTAE QLTKPGVDPA KIVDTLIDPS FARPIVAASH
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