Gene Bcen2424_6740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6740 
Symbol 
ID4453877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp984495 
End bp985817 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content67% 
IMG OID639698802 
Productxylose isomerase 
Protein accessionYP_840362 
Protein GI116687115 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2115] Xylose isomerase 
TIGRFAM ID[TIGR02630] xylose isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0817214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.561733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATT TCGAGCACAT TCCCGCGATT CGCTACGAAG GCCCGCAGTC GGACAACCCG 
CTTGCGTATC ACCATTACGA CCCCGACAAG CGCGTGCTCG GCAAGACGCT CGCCGAGCAT
CTGCGGATCG CGGTCTGCTA CTGGCACACG TTCGTATGGC CGGGCCACGA CATCTTCGGG
CAGGGCGCGT TCCAGCGGCC GTGGCAGCAG CCGGGCGACG CGCTCGAGCG GGCGCGGCAG
AAGGCGGACG CGGCGTTCGA ATTCTTCACG AAGCTCGGCA CGCCGTTCTA TACGTTCCAT
GACACCGACG TCGCGCCGGA AGGCGACAGC CTGCGCGACT ACGCAGCCAA TTTCGCGCGG
ATGGTCGACT ATCTCGGCGA GCGTCAGCAG GCAAGTGGCG TGCGGCTCCT GTGGGGCACC
GCGAACCTGT TCTCGCACCC GCGCTTCGCG GCCGGCGCCG CGACCAACCC GAACCCCGAC
GTGTTCGCAT GGGCGGCGAC CCAGGTGTGC CACGCGCTCG ACGCGACCCA CCGGCTCGGC
GGCGAAAACT ACGTGCTGTG GGGCGGACGG GAAGGCTACG AGACGCTGCT CAATACCGAC
CTGAAGCGCG AACGCGACCA GTTCGCCCGC TTCCTGTCGA TGGTCGTCGA GCACAAGCAC
CGGATCGGCT TCAAGGGCGC GCTGCTGATC GAGCCGAAGC CGCAGGAGCC GACCAAGCAC
CAGTACGACT ACGACGTCGC GACCGTGCAC GGCTTCCTCG TGCAGTACGG ACTCCAGAAC
GAGATTCGCG TGAACATCGA GGCGAACCAC GCGACGCTCG CCGGTCATTC GTTCCATCAC
GAGATCGCGA ACGCCTTCGC GCTCGGCGTG TTCGGCAGCG TCGACGCGAA CCGCGGCGAT
CCGCAGAACG GCTGGGACAC CGACCAGTTC CCGAACAGCG TCGAGGAGCT GACGCTCGCG
TTCTACGAGA TCCTGCGCCA CGGCGGCTTC ACGACCGGCG GGATGAACTT CGACGCGAAG
GTGCGGCGCC AGAGCATCGA TCCGGAAGAC CTGTTCTACG GCCACGTCGG CGCGATCGAC
GTGCTCGCGC TCGCGCTCGA ACGCGCGGCG GTGCTGGTCG AGAACGACCG GCTCGACGCG
CTGCGCCGGC AACGCTACGC GCAGTGGGAC GACGCGTTCG GCCGCAAGAT CCTGTCCGGC
GGCTATACGC TGGAATCGCT GGCGGCCGAC GCGCTCGCGC GTGGGGTGAA CCCGCGGCAT
GCGAGCGGCG CGCAGGAGCG GCTGGAGAAC ATCGTGAACC AGGCGATCTA CGGGCTGCGC
TGA
 
Protein sequence
MSYFEHIPAI RYEGPQSDNP LAYHHYDPDK RVLGKTLAEH LRIAVCYWHT FVWPGHDIFG 
QGAFQRPWQQ PGDALERARQ KADAAFEFFT KLGTPFYTFH DTDVAPEGDS LRDYAANFAR
MVDYLGERQQ ASGVRLLWGT ANLFSHPRFA AGAATNPNPD VFAWAATQVC HALDATHRLG
GENYVLWGGR EGYETLLNTD LKRERDQFAR FLSMVVEHKH RIGFKGALLI EPKPQEPTKH
QYDYDVATVH GFLVQYGLQN EIRVNIEANH ATLAGHSFHH EIANAFALGV FGSVDANRGD
PQNGWDTDQF PNSVEELTLA FYEILRHGGF TTGGMNFDAK VRRQSIDPED LFYGHVGAID
VLALALERAA VLVENDRLDA LRRQRYAQWD DAFGRKILSG GYTLESLAAD ALARGVNPRH
ASGAQERLEN IVNQAIYGLR