| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6717 |
|---|
| Symbol | |
|---|
| ID | 4454561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 956548 |
|---|
| End bp | 957696 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639698779 |
|---|
| Product | porin |
|---|
| Protein accession | YP_840339 |
|---|
| Protein GI | 116687092 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.653963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.435902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TGATGGCGGC CGTATCGGCC GCGAGCGCCA TGGGATTCGG CCTGACGGCC
CATGCGCAAA GCACCGTGAC GCTATACGGC CTGATCGACG AAGGCGTCAA TTTCACGAGC
AACGCGGGCG GCAGCAAGGC TTACCAGATG GTCAGCGGCG ATACCGTGGG CAGCAACTGG
GGGCTGAAAG GCACCGAGGA CCTCGGCGGC GGGCTGAGAG CGCTGTTCCA GCTCGAGAAC
GGCTTCAACG CGAGCACCGG CGCGCTCGGC GTGACGTCGC GGATGTTCGG CAGGCAGGCC
TACGTCGGGC TTGATTCCGA CCGGTTCGGC ACGCTCACGT TCGGCCGCCA GTACGACCCC
ACGCTCGACA TGTGGAGTCC TTTCACGGCC ACCGGCAACT GGCTCGGCGA CTTCGGCGCG
CACCCGTACG ACAACGACAA CGCCGACTGG GACTACCGCA TCCAGAACAG CGTCAAGTAC
GTGTCGCCCA CGTATGGCGG CTTCAAGGGC GAAGTGCTCT ACGGGCTCGC GAATCAGGCG
GGCGGCTTCG CGCGAAACCG CGTTTACAGC GCCGCCGTGC AGTACCAGGC CGGCGCATTT
TCCGCCGCCG TCGCGTACCT GAAGGCCAAC AACGGCGGCG CAATCGCGGG CGGCGCATTG
TCGAGCGACG ACACGGTCTT CAGCGGCCGC TCGCAGCAGA ACATCGATGC CGGCGCATCG
TACAAGTTCA GCGACAAGCT GACGCTGTCC GCCGCGTATT CTCACGTCGA CGTGACCAAC
CCCGAGTCGA ATCTCTACTT CACGAACCAG CCCGCGGCAG GCTCGCAGAA CGCGTGGAAA
TTCGACAACT TCGAGGTCAA CGGCCAGTAT TTCTTCCGGC CGGATCTCTG GCTAGGCGCC
GCCTATACCT ACACGCATGC GCATGTCGCG ACGGCGGCGG GCGATGCGTC GCCGAGCTGG
CACCAGCTGT CGATGATGCT CGACTACGAT CTCAGCAAGC GGACCTCGAC GTACATCCAG
GGCGCGTACC AGCATGCGAC CGGCAACACC GGCACCGACT TCGACTACGC GCACGTGCTG
GGCACGGCCG GGCAGTCGTC GGGCCGCAAC CAACTGGCGT TGCGCGTCGG GATGATGCAT
CGTTTCTGA
|
|---|
| Protein sequence | MKKMMAAVSA ASAMGFGLTA HAQSTVTLYG LIDEGVNFTS NAGGSKAYQM VSGDTVGSNW
GLKGTEDLGG GLRALFQLEN GFNASTGALG VTSRMFGRQA YVGLDSDRFG TLTFGRQYDP
TLDMWSPFTA TGNWLGDFGA HPYDNDNADW DYRIQNSVKY VSPTYGGFKG EVLYGLANQA
GGFARNRVYS AAVQYQAGAF SAAVAYLKAN NGGAIAGGAL SSDDTVFSGR SQQNIDAGAS
YKFSDKLTLS AAYSHVDVTN PESNLYFTNQ PAAGSQNAWK FDNFEVNGQY FFRPDLWLGA
AYTYTHAHVA TAAGDASPSW HQLSMMLDYD LSKRTSTYIQ GAYQHATGNT GTDFDYAHVL
GTAGQSSGRN QLALRVGMMH RF
|
|---|
| |