Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6709 |
Symbol | |
ID | 4453967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 945448 |
End bp | 946992 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639698771 |
Product | ABC transporter related |
Protein accession | YP_840331 |
Protein GI | 116687084 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.268301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.306288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATGC CTCGCAATCT GCCCGGTCAG GCCGCGCACG ACGAAGCCGA CCAGGAGATC CTGCGCCTGG ACGGGATTCG CAAGCGCTTC CCGGGCGTCC TCGCGCTCGA CGGGATTCGC CTCGACCTGC GCCGCGGCGA GGTGCATGCG GTGTGCGGCG AAAACGGCGC GGGCAAATCG ACGCTGATGA AGATCATCAG CGGCCAATAC CTGCCCGACG AGGGTGCCGT TCACTATCGC GGCGCGCCGG TGCGGTTTCG TTCGGCTTCC GAAGCGCAGG CGGCCGGCAT CTCGATCATC CACCAGGAAC TCAATCTCGT CCCGCACCTG AGCGTGGCGG AGAACCTGTT CCTTGCGCGC GAGCCGCGGC GCGGGCCGTT CGTCGATACG AAACGCATGA ACGCGGAGGC GGCGCGCTGC ATCGCGCGCA TCGGCCTGAA CGTCGCGCCG ACGACGAAGG TCGGCGTGCT GTCCATCGCG CAGCAGCAAA TGGTCGAGAT CGCGAAGGCG CTGTCGCACG ATGCGCGCGT GCTGATCATG GACGAGCCCA CGTCGTCGCT GACGGAAGCG GAAACGGTGC AACTCTTTCG CATCATCGAG GAGCTGCGCG CCGACGGCGT GGCGATTCTG TATATCTCGC ACCGGCTCGA CGAAATGGCG CAGATCGTCG ATCGCGTGAC GGTGCTGCGC GACGGGCGCC ACATTTCGAC GGACGATTTC GCCGACGTGA GCATCGACGA CATCGTCGCG CGCATGGTGG GGCGGACGCT CGACGACGCC TATCCGTCGC GGCAATCGGT GCCGACCGAC GACGTGCTGC TCGACGTGCG GGACCTGCGT CGCGACGGCG TGTTCGGGCC GGTGTCGTTC GCGCTGCGCC GTGGCGAGAT CCTCGGTTTC GCGGGATTGA TGGGCGCCGG GCGCACCGAG ATCGCGCGCG CGATCTTCGG CGCCGATCGT CCCGACGGCG GCACGATCGC GCTGCACGGC CGGCCCGTGA CGATCCGCTC GCCGCGCGAG GCGATCCGGC ACGGCATCGC GTACCTGTCG GAGGACCGCA AGAAGGAGGG GCTCGCGCTG CCGATGCCGG TCGCGGCGAA TCTCACGCTC GCGAACGTGC GCGGCATCGC GTCGCGCTTC GGATTCCTGC GTTTCGACGA CGAGATCGAC GTGGCGCGCC GCTACGTGCA GGACCTGGCG ATTCGCACGC CGTCCGTGCA CCAGCGCGTG CGCAACCTGT CCGGCGGCAA CCAGCAGAAG GTCGTCATCG GCAAATGGCT GTACCGCGGC TCGAAGATCC TGTTCTTCGA CGAGCCGACG CGCGGGATCG ACGTCGGCGC CAAATTCGCG ATCTACGGGC TGATGGACCG GCTCGCCGCC GACGGCGTCG GCGTGGTGCT GATCAGTTCG GAACTGCCGG AGCTGCTCGG CATGACCGAC CGGATCGCCG TTTTTCATGA AGGTCGAATG ACCGCCATTC TCGATACGAA ACACACCAGT CAGGAGGAGA TCATGCACTA CGCGTCGGGG CGTTCCCATG CTTGA
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Protein sequence | MAMPRNLPGQ AAHDEADQEI LRLDGIRKRF PGVLALDGIR LDLRRGEVHA VCGENGAGKS TLMKIISGQY LPDEGAVHYR GAPVRFRSAS EAQAAGISII HQELNLVPHL SVAENLFLAR EPRRGPFVDT KRMNAEAARC IARIGLNVAP TTKVGVLSIA QQQMVEIAKA LSHDARVLIM DEPTSSLTEA ETVQLFRIIE ELRADGVAIL YISHRLDEMA QIVDRVTVLR DGRHISTDDF ADVSIDDIVA RMVGRTLDDA YPSRQSVPTD DVLLDVRDLR RDGVFGPVSF ALRRGEILGF AGLMGAGRTE IARAIFGADR PDGGTIALHG RPVTIRSPRE AIRHGIAYLS EDRKKEGLAL PMPVAANLTL ANVRGIASRF GFLRFDDEID VARRYVQDLA IRTPSVHQRV RNLSGGNQQK VVIGKWLYRG SKILFFDEPT RGIDVGAKFA IYGLMDRLAA DGVGVVLISS ELPELLGMTD RIAVFHEGRM TAILDTKHTS QEEIMHYASG RSHA
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