Gene Bcen2424_6709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6709 
Symbol 
ID4453967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp945448 
End bp946992 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content67% 
IMG OID639698771 
ProductABC transporter related 
Protein accessionYP_840331 
Protein GI116687084 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.268301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.306288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGC CTCGCAATCT GCCCGGTCAG GCCGCGCACG ACGAAGCCGA CCAGGAGATC 
CTGCGCCTGG ACGGGATTCG CAAGCGCTTC CCGGGCGTCC TCGCGCTCGA CGGGATTCGC
CTCGACCTGC GCCGCGGCGA GGTGCATGCG GTGTGCGGCG AAAACGGCGC GGGCAAATCG
ACGCTGATGA AGATCATCAG CGGCCAATAC CTGCCCGACG AGGGTGCCGT TCACTATCGC
GGCGCGCCGG TGCGGTTTCG TTCGGCTTCC GAAGCGCAGG CGGCCGGCAT CTCGATCATC
CACCAGGAAC TCAATCTCGT CCCGCACCTG AGCGTGGCGG AGAACCTGTT CCTTGCGCGC
GAGCCGCGGC GCGGGCCGTT CGTCGATACG AAACGCATGA ACGCGGAGGC GGCGCGCTGC
ATCGCGCGCA TCGGCCTGAA CGTCGCGCCG ACGACGAAGG TCGGCGTGCT GTCCATCGCG
CAGCAGCAAA TGGTCGAGAT CGCGAAGGCG CTGTCGCACG ATGCGCGCGT GCTGATCATG
GACGAGCCCA CGTCGTCGCT GACGGAAGCG GAAACGGTGC AACTCTTTCG CATCATCGAG
GAGCTGCGCG CCGACGGCGT GGCGATTCTG TATATCTCGC ACCGGCTCGA CGAAATGGCG
CAGATCGTCG ATCGCGTGAC GGTGCTGCGC GACGGGCGCC ACATTTCGAC GGACGATTTC
GCCGACGTGA GCATCGACGA CATCGTCGCG CGCATGGTGG GGCGGACGCT CGACGACGCC
TATCCGTCGC GGCAATCGGT GCCGACCGAC GACGTGCTGC TCGACGTGCG GGACCTGCGT
CGCGACGGCG TGTTCGGGCC GGTGTCGTTC GCGCTGCGCC GTGGCGAGAT CCTCGGTTTC
GCGGGATTGA TGGGCGCCGG GCGCACCGAG ATCGCGCGCG CGATCTTCGG CGCCGATCGT
CCCGACGGCG GCACGATCGC GCTGCACGGC CGGCCCGTGA CGATCCGCTC GCCGCGCGAG
GCGATCCGGC ACGGCATCGC GTACCTGTCG GAGGACCGCA AGAAGGAGGG GCTCGCGCTG
CCGATGCCGG TCGCGGCGAA TCTCACGCTC GCGAACGTGC GCGGCATCGC GTCGCGCTTC
GGATTCCTGC GTTTCGACGA CGAGATCGAC GTGGCGCGCC GCTACGTGCA GGACCTGGCG
ATTCGCACGC CGTCCGTGCA CCAGCGCGTG CGCAACCTGT CCGGCGGCAA CCAGCAGAAG
GTCGTCATCG GCAAATGGCT GTACCGCGGC TCGAAGATCC TGTTCTTCGA CGAGCCGACG
CGCGGGATCG ACGTCGGCGC CAAATTCGCG ATCTACGGGC TGATGGACCG GCTCGCCGCC
GACGGCGTCG GCGTGGTGCT GATCAGTTCG GAACTGCCGG AGCTGCTCGG CATGACCGAC
CGGATCGCCG TTTTTCATGA AGGTCGAATG ACCGCCATTC TCGATACGAA ACACACCAGT
CAGGAGGAGA TCATGCACTA CGCGTCGGGG CGTTCCCATG CTTGA
 
Protein sequence
MAMPRNLPGQ AAHDEADQEI LRLDGIRKRF PGVLALDGIR LDLRRGEVHA VCGENGAGKS 
TLMKIISGQY LPDEGAVHYR GAPVRFRSAS EAQAAGISII HQELNLVPHL SVAENLFLAR
EPRRGPFVDT KRMNAEAARC IARIGLNVAP TTKVGVLSIA QQQMVEIAKA LSHDARVLIM
DEPTSSLTEA ETVQLFRIIE ELRADGVAIL YISHRLDEMA QIVDRVTVLR DGRHISTDDF
ADVSIDDIVA RMVGRTLDDA YPSRQSVPTD DVLLDVRDLR RDGVFGPVSF ALRRGEILGF
AGLMGAGRTE IARAIFGADR PDGGTIALHG RPVTIRSPRE AIRHGIAYLS EDRKKEGLAL
PMPVAANLTL ANVRGIASRF GFLRFDDEID VARRYVQDLA IRTPSVHQRV RNLSGGNQQK
VVIGKWLYRG SKILFFDEPT RGIDVGAKFA IYGLMDRLAA DGVGVVLISS ELPELLGMTD
RIAVFHEGRM TAILDTKHTS QEEIMHYASG RSHA